fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G25830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047520 not found in 366aa AT5G25830.1 1st_1st 0.468802698 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G25830.1     MEDEAH-----EFF---HTSD-FAVDDLLVDFSNDDDEENDVVADSTTT--TTIT-----
gm047520_Glyma1 MESPSSSPIFPQFTFDNNNSDHFIVEDLL-DFSNDDVVITDATFDSITTDSSTVTTTVHS
                **. :      :*    :.** * *:*** ******   .*.. ** **  :*:*     

AT5G25830.1     -DSSNFSAADLPSFHGDV-----QDGTSFSGDLCIPSDDLADELEWLSNIVDESLSPEDV
gm047520_Glyma1 CNSSSFSGSD-PNTVPDIGSRNLSDG-HFSDDLCVPYDDIA-ELEWLSNFVEESFSSEDL
                 :**.**.:* *.   *:     .**  **.***:* **:* *******:*:**:*.**:

AT5G25830.1     HKLELISGFKSRPD--------------PKSDTGSPENPNSSSPIFTTDVSVPAKARSKR
gm047520_Glyma1 HKMQLISGMNAQNNDVSEAREFHYEPTTTRSGSHTPE-PTRNSPIFNSEVSVPAKARSKR
                **::****:::: :              .:*.: :** *. .****.::***********

AT5G25830.1     SRAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRR
gm047520_Glyma1 SRGPPCNWASR-LLVLSPTSSSSDNEVVVPSPATAEPCPTPAKKMAKVGP---------R
                **...****** **  :  .*.  .*.::.*    .* .:*.  ** :*          *

AT5G25830.1     KKDVSSPESGGA--EERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA
gm047520_Glyma1 KKDSSSSDGNGSGGDGRRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA
                *** **.:..*:  : ********************************************

AT5G25830.1     ASPTFVLAKHSNSHRKVMELRRQKEMSRA-------------HHEFIHHHHGTDTAMIFD
gm047520_Glyma1 ASPTFVLTKHSNSHRKVLELRRQKEMVRSQQHHHQHQQQFLQHHHHNHHHYQHHQNMMFD
                *******:*********:******** *:             **.. ***:  .  *:**

AT5G25830.1     VSSDGDDYLIHHNVGPDFRQLI
gm047520_Glyma1 V-SNGDDYLIHQYVGPDFRQLI
                * *:*******: *********
BoxShade v3.31 C (beta, 970507) Output
AT5G25830.1     M E D E A H - - - - - E F F - - - H T S D - F A V D D L L V D F S N D D D E E N D V V A D S T T T - - T T I T - - - - -
gm047520_Glyma1    M E S P S S S P I F P Q F T F D N N N S D H F I V E D L L - D F S N D D V V I T D A T F D S I T T D S S T V T T T V H S
 
AT5G25830.1     - D S S N F S A A D L P S F H G D V - - - - - Q D G T S F S G D L C I P S D D L A D E L E W L S N I V D E S L S P E D V
gm047520_Glyma1    C N S S S F S G S D - P N T V P D I G S R N L S D G - H F S D D L C V P Y D D I A - E L E W L S N F V E E S F S S E D L
 
AT5G25830.1     H K L E L I S G F K S R P D - - - - - - - - - - - - - - P K S D T G S P E N P N S S S P I F T T D V S V P A K A R S K R
gm047520_Glyma1    H K M Q L I S G M N A Q N N D V S E A R E F H Y E P T T T R S G S H T P E - P T R N S P I F N S E V S V P A K A R S K R
 
AT5G25830.1     S R A A A C N W A S R G L L K E T F Y D S P F T G E T I L S S Q Q H L S P P T S P P L L M A P L G K K Q A V D G G H R R
gm047520_Glyma1    S R G P P C N W A S R - L L V L S P T S S S S D N E V V V P S P A T A E P C P T P A K K M A K V G P - - - - - - - - - R
 
AT5G25830.1     K K D V S S P E S G G A - - E E R R C L H C A T D K T P Q W R T G P M G P K T L C N A C G V R Y K S G R L V P E Y R P A
gm047520_Glyma1    K K D S S S S D G N G S G G D G R R C L H C A T D K T P Q W R T G P M G P K T L C N A C G V R Y K S G R L V P E Y R P A
 
AT5G25830.1     A S P T F V L A K H S N S H R K V M E L R R Q K E M S R A - - - - - - - - - - - - - H H E F I H H H H G T D T A M I F D
gm047520_Glyma1    A S P T F V L T K H S N S H R K V L E L R R Q K E M V R S Q Q H H H Q H Q Q Q F L Q H H H H N H H H Y Q H H Q N M M F D
 
AT5G25830.1     V S S D G D D Y L I H H N V G P D F R Q L I
gm047520_Glyma1    V - S N G D D Y L I H Q Y V G P D F R Q L I
 
0