fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G26930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018019 not found in 190aa AT5G26930.1 1st_1st 0.370370370 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G26930.1     MDPRKLLSCSSSYVSVRMKEEKGTIR----------------------------------
Sb018019_Sorbi1 ----------LTYVLSKKQSGRSTARSRLDEIDAAGSIDRPESEMMMDSAAEHQHHKVIG
                           :**  : :. :.* *                                  

AT5G26930.1     ----------CCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGIHIIR----
Sb018019_Sorbi1 IAPVAEAGRPCCVECRTTATPMWRGGPTGPRSLCNACGIRYRKKRRQE-LGLDTTKKPQQ
                          ** **:** ***********:*********:**:**.* **:.  :    

AT5G26930.1     ----------------------------SHKSLASK--KINLLSSSHGGVAVKKRRSLKE
Sb018019_Sorbi1 NQAQPQTPQQQQQQQQQQQQQQHQDQDQSHSQATSAVVKENNTKSSNLQV-VKKRRVLMG
                                            **.. :*   * *  .**:  * ***** *  

AT5G26930.1     EEQAALCLLLLSCSSVLA----
Sb018019_Sorbi1 VEEAAILLMALSSSSRSTLLHG
                 *:**: *: **.**  :
BoxShade v3.31 C (beta, 970507) Output
AT5G26930.1     M D P R K L L S C S S S Y V S V R M K E E K G T I R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb018019_Sorbi1    - - - - - - - - - - L T Y V L S K K Q S G R S T A R S R L D E I D A A G S I D R P E S E M M M D S A A E H Q H H K V I G
 
AT5G26930.1     - - - - - - - - - - C C S E C K T T K T P M W R G G P T G P K S L C N A C G I R H R K Q R R S E L L G I H I I R - - - -
Sb018019_Sorbi1    I A P V A E A G R P C C V E C R T T A T P M W R G G P T G P R S L C N A C G I R Y R K K R R Q E - L G L D T T K K P Q Q
 
AT5G26930.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - S H K S L A S K - - K I N L L S S S H G G V A V K K R R S L K E
Sb018019_Sorbi1    N Q A Q P Q T P Q Q Q Q Q Q Q Q Q Q Q Q Q Q H Q D Q D Q S H S Q A T S A V V K E N N T K S S N L Q V - V K K R R V L M G
 
AT5G26930.1     E E Q A A L C L L L L S C S S V L A - - - -
Sb018019_Sorbi1    V E E A A I L L M A L S S S S R S T L L H G
 
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