fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G27810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048644 not found in 239aa AT5G48670.1 1st_not 0.534979423 II
Pt000552 not found in 259aa AT5G48670.1 1st_not 0.580246913 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G27810.1     ----------------------------MKKVHELSTLCGITSCAIIYSPYDTSHEVWPS
gm048644_Glyma1 MTRKKVKLAFIANDSARKATFKKRKKGLMKKVSELSTLCGIDACAIVYSPYDPQPEVWPS
pt000552_POPTR_ MTRKKVKLAFIVNDSARKATFKKRRKGLMKKVSELSTLCGIDACAIIYSPYDSQPEVWPS
                                            **** ******** :***:*****.. *****

AT5G27810.1     NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKPTENLRRQRKDNKELEMTEVMFRC
gm048644_Glyma1 PMGVQRVLAKFRRMPELEQSKKMVNQESFLRQRIMKAKDQLKKQRKDNREKEMTQLMFQY
pt000552_POPTR_ PLGVQRVLSKFKTMPEMEQSKKMVNQESFLRQRITKASEQLRKQRKENREKEVTQAMFQC
                  *****:::*: :**::* ****:**.**:*** *..::*::***:*:* *:*: **: 

AT5G27810.1     LI-GNM----------------------------EMLKSESQSE-------------STT
gm048644_Glyma1 LSAGKI-MHNISMVDLNDLAWLIDQNLKDINRRIEVLTKNAQSQ-------PQIAAPAVT
pt000552_POPTR_ LT-GKINLANLNMIDLNDLGWMIDRNLKDVEKRVETLNKRSRSSTGGTSHTSQLAAVAAT
                *  *::                            * *...::*.             :.*

AT5G27810.1     ----------------------------------MVYEN---------------------
gm048644_Glyma1 DVAAKVEDKGQGSQHGHQGFD--------INMDLMQKQNWFMNLMNN------GGGGGNE
pt000552_POPTR_ --GAGPSNGGQQAPESSQKADVLATTNLGVNVDSMLRQQWFMDMVTPQETAILGFGGDDN
                                                  *  ::                     

AT5G27810.1     ---------------DEPS----
gm048644_Glyma1 AMPIVGDVNQQNGFWPNPFFH--
pt000552_POPTR_ MMLPFGDTN-HNALFSNPFFPLN
                                :*
BoxShade v3.31 C (beta, 970507) Output
AT5G27810.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K K V H E L S T L C G I T S C A I I Y S P Y D T S H E V W P S
gm048644_Glyma1    M T R K K V K L A F I A N D S A R K A T F K K R K K G L M K K V S E L S T L C G I D A C A I V Y S P Y D P Q P E V W P S
pt000552_POPTR_    M T R K K V K L A F I V N D S A R K A T F K K R R K G L M K K V S E L S T L C G I D A C A I I Y S P Y D S Q P E V W P S
 
AT5G27810.1     N S G V Q R V V S E F R T L P E M D Q H K K M V D Q E G F L K Q R I A K P T E N L R R Q R K D N K E L E M T E V M F R C
gm048644_Glyma1    P M G V Q R V L A K F R R M P E L E Q S K K M V N Q E S F L R Q R I M K A K D Q L K K Q R K D N R E K E M T Q L M F Q Y
pt000552_POPTR_    P L G V Q R V L S K F K T M P E M E Q S K K M V N Q E S F L R Q R I T K A S E Q L R K Q R K E N R E K E V T Q A M F Q C
 
AT5G27810.1     L I - G N M - - - - - - - - - - - - - - - - - - - - - - - - - - - - E M L K S E S Q S E - - - - - - - - - - - - - S T T
gm048644_Glyma1    L S A G K I - M H N I S M V D L N D L A W L I D Q N L K D I N R R I E V L T K N A Q S Q - - - - - - - P Q I A A P A V T
pt000552_POPTR_    L T - G K I N L A N L N M I D L N D L G W M I D R N L K D V E K R V E T L N K R S R S S T G G T S H T S Q L A A V A A T
 
AT5G27810.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M V Y E N - - - - - - - - - - - - - - - - - - - - -
gm048644_Glyma1    D V A A K V E D K G Q G S Q H G H Q G F D - - - - - - - - I N M D L M Q K Q N W F M N L M N N - - - - - - G G G G G N E
pt000552_POPTR_    - - G A G P S N G G Q Q A P E S S Q K A D V L A T T N L G V N V D S M L R Q Q W F M D M V T P Q E T A I L G F G G D D N
 
AT5G27810.1     - - - - - - - - - - - - - - - D E P S - - - -
gm048644_Glyma1    A M P I V G D V N Q Q N G F W P N P F F H - -
pt000552_POPTR_    M M L P F G D T N - H N A L F S N P F F P L N
 
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