fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G27910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031239 not found in 365aa AT5G63470.2 1st_not 0.403125 II
Gm015491 not found in 229aa AT3G48590.1 1st_not 0.4375 II
Pt027792 not found in 248aa AT3G48590.1 1st_not 0.428125 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G27910.1     -----MENNNGNNQ----------------LPPKG-------------------------
Sb031239_Sorbi1 IRSLSPEHPSNGAQ------------IHHPSPASGHGRARRVPSAPRRRVPRRAVRARAG
pt027792_POPTR_ -----MDNTTTNHQPQPTAYPTQSITTTPPLPPAG-------------------------
gm015491_Glyma0 -----ME--TNNQQQQQQGAQAQS----GPYPVAGAG-------------------GSAG
                      :  . . *                 *  *                         

AT5G27910.1     ----------------------------------------------NEQLKSFWS---KE
Sb031239_Sorbi1 SRAVPSSPAAAGSPNLAAGRRGGAAAAALLGGAVPRDRGHHRLQEPQPA-----AGPHQE
pt027792_POPTR_ -GAPSSTPF------------------------------HHLLQQQQQQLQMFWSYQRQE
gm015491_Glyma0 AGAGAPPPF------------------------------QHLLQQQQQQLQMFWSYQRQE
                                                              :       :   :*

AT5G27910.1     MEGNLDFKNHDLPITRIKKIMKYDPDVTMIASEA--PILLSKACEMFIMDLTMRSWLHAQ
Sb031239_Sorbi1 DHEGRRGRAHD----RRRGARRLRPRLRDVHPRAHPPRLGARRGEQAPHPAEVRHRRRRR
pt027792_POPTR_ IEQVNDFKNHQLPLARIKKIMKADEDVRMISAEA--PILFAKACELFILELTIRSWLHAE
gm015491_Glyma0 IEHVNDFKNHQLPLARIKKIMKADEDVRMISAEA--PILFAKACELFILELTIRSWLHAE
                 .     : *:    * :   :    :  : ..*  * * ::  *       :*   : .

AT5G27910.1     ESKRVTLQKSNVDAAVAQTVIFDFLLD----DDIEVKRESV--------AAAADPVAMPP
Sb031239_Sorbi1 AHRGLRLPRRHRAAGRGQGS--------------RLRRRHG-------TSRDPAPRRRPA
pt027792_POPTR_ ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD--EIKEEAAGLGGIVGATASGVPYYYPP
gm015491_Glyma0 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRD--EIKDDAA----LVGATASGVPYYYPP
                  :   * : .  *.  :                .::            :    *   *.

AT5G27910.1     IDDGELPP----GMVIGTP-VCCSLGIHQPQPQMQAWPGAWTSVSGEEEE-----ARGKK
Sb031239_Sorbi1 RHR---PH----GLLL-RPAAVTNLASLP-----------WSLCG---------------
pt027792_POPTR_ MGQ---PAAATGGMMIGRPAMDPATGVYV-QPPSQAWQSVWQTAATEDGSYGSGGASGGQ
gm015491_Glyma0 IGQ---PA----GMMIGRPAVDPATGVYV-QPPSQAWQSVWQSAA-EDASYGTGGA-GAQ
                      *     *:::  *      .              *   .               

AT5G27910.1     GGDDGN-----------
Sb031239_Sorbi1 ----------FYLVN--
pt027792_POPTR_ GNLDGQDYSKWTLPQLK
gm015491_Glyma0 RSLDGQS----------
BoxShade v3.31 C (beta, 970507) Output
AT5G27910.1     - - - - - M E N N N G N N Q - - - - - - - - - - - - - - - - L P P K G - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031239_Sorbi1    I R S L S P E H P S N G A Q - - - - - - - - - - - - I H H P S P A S G H G R A R R V P S A P R R R V P R R A V R A R A G
pt027792_POPTR_    - - - - - M D N T T T N H Q P Q P T A Y P T Q S I T T T P P L P P A G - - - - - - - - - - - - - - - - - - - - - - - - -
gm015491_Glyma0    - - - - - M E - - T N N Q Q Q Q Q Q G A Q A Q S - - - - G P Y P V A G A G - - - - - - - - - - - - - - - - - - - G S A G
 
AT5G27910.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N E Q L K S F W S - - - K E
Sb031239_Sorbi1    S R A V P S S P A A A G S P N L A A G R R G G A A A A A L L G G A V P R D R G H H R L Q E P Q P A - - - - - A G P H Q E
pt027792_POPTR_    - G A P S S T P F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H L L Q Q Q Q Q Q L Q M F W S Y Q R Q E
gm015491_Glyma0    A G A G A P P P F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q H L L Q Q Q Q Q Q L Q M F W S Y Q R Q E
 
AT5G27910.1     M E G N L D F K N H D L P I T R I K K I M K Y D P D V T M I A S E A - - P I L L S K A C E M F I M D L T M R S W L H A Q
Sb031239_Sorbi1    D H E G R R G R A H D - - - - R R R G A R R L R P R L R D V H P R A H P P R L G A R R G E Q A P H P A E V R H R R R R R
pt027792_POPTR_    I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A - - P I L F A K A C E L F I L E L T I R S W L H A E
gm015491_Glyma0    I E H V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A - - P I L F A K A C E L F I L E L T I R S W L H A E
 
AT5G27910.1     E S K R V T L Q K S N V D A A V A Q T V I F D F L L D - - - - D D I E V K R E S V - - - - - - - - A A A A D P V A M P P
Sb031239_Sorbi1    A H R G L R L P R R H R A A G R G Q G S - - - - - - - - - - - - - - R L R R R H G - - - - - - - T S R D P A P R R R P A
pt027792_POPTR_    E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D - - E I K E E A A G L G G I V G A T A S G V P Y Y Y P P
gm015491_Glyma0    E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D - - E I K D D A A - - - - L V G A T A S G V P Y Y Y P P
 
AT5G27910.1     I D D G E L P P - - - - G M V I G T P - V C C S L G I H Q P Q P Q M Q A W P G A W T S V S G E E E E - - - - - A R G K K
Sb031239_Sorbi1    R H R - - - P H - - - - G L L L - R P A A V T N L A S L P - - - - - - - - - - - W S L C G - - - - - - - - - - - - - - -
pt027792_POPTR_    M G Q - - - P A A A T G G M M I G R P A M D P A T G V Y V - Q P P S Q A W Q S V W Q T A A T E D G S Y G S G G A S G G Q
gm015491_Glyma0    I G Q - - - P A - - - - G M M I G R P A V D P A T G V Y V - Q P P S Q A W Q S V W Q S A A - E D A S Y G T G G A - G A Q
 
AT5G27910.1     G G D D G N - - - - - - - - - - -
Sb031239_Sorbi1    - - - - - - - - - - F Y L V N - -
pt027792_POPTR_    G N L D G Q D Y S K W T L P Q L K
gm015491_Glyma0    R S L D G Q S - - - - - - - - - -
 
0