fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G27910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022933 not found in 237aa AT3G48590.1 not_not 0.425 III
Pt000315 not found in 266aa AT1G56170.2 not_not 0.41875 III
Pt036437 not found in 258aa AT1G56170.2 not_not 0.4125 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G27910.1     MENNNGNNQLPPK-----------------------------------------------
pt036437_POPTR_ MDQSQQTRQQQS----QQQPVV---AGAGQMAYASTPYQTAPMVASGTPSIAIPSPTQSP
pt000315_POPTR_ MDQSEQTQQQQSQQQQQQQPVMGVAASAGQVAYASTPYQTAPMVASGTPSIAIPSQTQPP
pt022933_POPTR_ MDNTNTNTNHQPQ---------------------STAY--PPHSTTTTP------PPPPP
                *::.: . :  .                                                

AT5G27910.1     -------------------------GNEQLKSFWS---KEMEGNLDFKNHDLPITRIKKI
pt036437_POPTR_ ATFSNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWTIQMQEIEQTTDFKNHSLPLARIKKI
pt000315_POPTR_ ATFSNSPHQLTYQQAQHFHH---QQQQQQLQMFWTNQMHEIEQTTDFKNHSLPLARIKKI
pt022933_POPTR_ GAPSSAP----------FHH-LLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIKKI
                                          ::**: **:   :*:*   *****.**::*****

AT5G27910.1     MKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIF
pt036437_POPTR_ MKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF
pt000315_POPTR_ MKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF
pt022933_POPTR_ MKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIF
                ** * ** **::***::::****:**::**:***:*::*.** ****.:: **:::* :*

AT5G27910.1     DFLLD----DDIEVKRES----------VAAAAD--PVAM-P--PIDDGELPP-------
pt036437_POPTR_ DFLVDIIPRD--ELKEEGLGVTKATIP-VGPPAD-LPYYYVPQHPVG----PP-------
pt000315_POPTR_ DFLVDIIPRD--ELKEEGLGVTKSTIPVVGSPAD-LPYYYVPQHPVG----PP-------
pt022933_POPTR_ DFLVDIVPRD--EIKEEAAGLGGI----VGATASGVPYYY-P--PMG----QPAAAAAAG
                ***:*    *  *:*.*.          *...*.  *    *  *:.     *       

AT5G27910.1     GMVIGTP-V--CCSLGIHQPQPQM--QAWPGAWTSVSGEE-EEARGKKGGDDGN-
pt036437_POPTR_ GMIMGKP-VDQAAAYEAQQPQPPVALMPWLQ---TQPQQQ-----------QSDP
pt000315_POPTR_ GMIMGNP-VDQAATYGAQQPRPPMAFMPWPQPQPQQPQQR-----------QSDT
pt022933_POPTR_ GMMIGRPAVDPATGVYVQPPS-----QAWQSVWQTAAAEDGSYGSGGASGGQGET
                **::* * *  .     : *       .*       . :            :.:
BoxShade v3.31 C (beta, 970507) Output
AT5G27910.1     M E N N N G N N Q L P P K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt036437_POPTR_    M D Q S Q Q T R Q Q Q S - - - - Q Q Q P V V - - - A G A G Q M A Y A S T P Y Q T A P M V A S G T P S I A I P S P T Q S P
pt000315_POPTR_    M D Q S E Q T Q Q Q Q S Q Q Q Q Q Q Q P V M G V A A S A G Q V A Y A S T P Y Q T A P M V A S G T P S I A I P S Q T Q P P
pt022933_POPTR_    M D N T N T N T N H Q P Q - - - - - - - - - - - - - - - - - - - - - S T A Y - - P P H S T T T T P - - - - - - P P P P P
 
AT5G27910.1     - - - - - - - - - - - - - - - - - - - - - - - - - G N E Q L K S F W S - - - K E M E G N L D F K N H D L P I T R I K K I
pt036437_POPTR_    A T F S N S P H Q L T Y Q Q A Q H F H H Q Q Q Q Q Q Q Q Q L Q M F W T I Q M Q E I E Q T T D F K N H S L P L A R I K K I
pt000315_POPTR_    A T F S N S P H Q L T Y Q Q A Q H F H H - - - Q Q Q Q Q Q L Q M F W T N Q M H E I E Q T T D F K N H S L P L A R I K K I
pt022933_POPTR_    G A P S S A P - - - - - - - - - - F H H - L L Q Q Q Q Q Q L Q M F W S Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I
 
AT5G27910.1     M K Y D P D V T M I A S E A P I L L S K A C E M F I M D L T M R S W L H A Q E S K R V T L Q K S N V D A A V A Q T V I F
pt036437_POPTR_    M K A D E D V R M I S A E A P V I F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I S R T D V F
pt000315_POPTR_    M K A D E D V R M I S A E A P V I F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I S R T D V F
pt022933_POPTR_    M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A E E N K R R T L Q K N D I A A A I T R T D I F
 
AT5G27910.1     D F L L D - - - - D D I E V K R E S - - - - - - - - - - V A A A A D - - P V A M - P - - P I D D G E L P P - - - - - - -
pt036437_POPTR_    D F L V D I I P R D - - E L K E E G L G V T K A T I P - V G P P A D - L P Y Y Y V P Q H P V G - - - - P P - - - - - - -
pt000315_POPTR_    D F L V D I I P R D - - E L K E E G L G V T K S T I P V V G S P A D - L P Y Y Y V P Q H P V G - - - - P P - - - - - - -
pt022933_POPTR_    D F L V D I V P R D - - E I K E E A A G L G G I - - - - V G A T A S G V P Y Y Y - P - - P M G - - - - Q P A A A A A A G
 
AT5G27910.1     G M V I G T P - V - - C C S L G I H Q P Q P Q M - - Q A W P G A W T S V S G E E - E E A R G K K G G D D G N -
pt036437_POPTR_    G M I M G K P - V D Q A A A Y E A Q Q P Q P P V A L M P W L Q - - - T Q P Q Q Q - - - - - - - - - - - Q S D P
pt000315_POPTR_    G M I M G N P - V D Q A A T Y G A Q Q P R P P M A F M P W P Q P Q P Q Q P Q Q R - - - - - - - - - - - Q S D T
pt022933_POPTR_    G M M I G R P A V D P A T G V Y V Q P P S - - - - - Q A W Q S V W Q T A A A E D G S Y G S G G A S G G Q G E T
 
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