fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G27910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027792 not found in 248aa AT3G48590.1 1st_not 0.428125 II
Pt022933 not found in 237aa AT3G48590.1 not_not 0.425 III
Pt000315 not found in 266aa AT1G56170.2 not_not 0.41875 III
Pt036437 not found in 258aa AT1G56170.2 not_not 0.4125 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G27910.1     ME--NNNGNNQ-------------------------------------------LPPKG-
pt000315_POPTR_ MD--QSEQTQQQQSQQQQQQQPVMGVAASAGQVAYASTPYQTAPMVASGTPSIAIPSQTQ
pt022933_POPTR_ MDNTNTNTNHQPQS------------------TAYPPHSTTTTP------P----PPPPG
pt027792_POPTR_ MD--NTTTNHQPQP------------------TAYPTQSITTTP------P---LPPAGG
pt036437_POPTR_ MD--QSQQTRQQQS----QQQPVV---AGAGQMAYASTPYQTAPMVASGTPSIAIPSPTQ
                *:  :.  ..*                                            *.   

AT5G27910.1     ----------------------------NEQLKSFWS---KEMEGNLDFKNHDLPITRIK
pt000315_POPTR_ PPATFSNSPHQLTYQQAQHFHH---QQQQQQLQMFWTNQMHEIEQTTDFKNHSLPLARIK
pt022933_POPTR_ AP---SSAP----------FHH-LLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIK
pt027792_POPTR_ AP---SSTP----------FHH-LLQQQQQQLQMFWSYQRQEIEQVNDFKNHQLPLARIK
pt036437_POPTR_ SPATFSNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWTIQMQEIEQTTDFKNHSLPLARIK
                                            ::**: **:   :*:*   *****.**::***

AT5G27910.1     KIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTV
pt000315_POPTR_ KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTD
pt022933_POPTR_ KIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTD
pt027792_POPTR_ KIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTD
pt036437_POPTR_ KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTD
                **** * ** **::***::::****:**::**:***:*::*.** ****.:: **:::* 

AT5G27910.1     IFDFLLD----DDIEVKRES----------VAAAAD--PVAM-P--PIDDGELPP-----
pt000315_POPTR_ VFDFLVDIIPRD--ELKEEGLGVTKSTIPVVGSPAD-LPYYYVPQHPVG----PP-----
pt022933_POPTR_ IFDFLVDIVPRD--EIKEEAAGLGGI----VGATASGVPYYY-P--PMG----QPAAAAA
pt027792_POPTR_ IFDFLVDIVPRD--EIKEEAAGLGGI----VGATASGVPYYY-P--PMG----QP--AAA
pt036437_POPTR_ VFDFLVDIIPRD--ELKEEGLGVTKATIP-VGPPAD-LPYYYVPQHPVG----PP-----
                :****:*    *  *:*.*.          *...*.  *    *  *:.     *     

AT5G27910.1     --GMVIGTPV--CCSLGIHQPQPQMQAWPGAWTSVSGEEEEARGKKG--GDDGN------
pt000315_POPTR_ --GMIMGNPVDQAATYGAQQPRPP-MAFMPWPQP-QPQQPQQRQSDT-------------
pt022933_POPTR_ AGGMMIGRPAVDPATGVYVQP-PS-QAWQSVWQT-AAAEDGSYGSGGASGGQGET-----
pt027792_POPTR_ TGGMMIGRPAMDPATGVYVQP-PS-QAWQSVWQT-AATEDGSYGSGGASGGQGNLDGQDY
pt036437_POPTR_ --GMIMGKPVDQAAAYEAQQPQPP-VALMPWLQ----TQPQQQQSDP-------------
                  **::* *.   .:    ** *   *           :     .               

AT5G27910.1     ---------
pt000315_POPTR_ ---------
pt022933_POPTR_ ---------
pt027792_POPTR_ SKWTLPQLK
pt036437_POPTR_ ---------
BoxShade v3.31 C (beta, 970507) Output
AT5G27910.1     M E - - N N N G N N Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L P P K G -
pt000315_POPTR_    M D - - Q S E Q T Q Q Q Q S Q Q Q Q Q Q Q P V M G V A A S A G Q V A Y A S T P Y Q T A P M V A S G T P S I A I P S Q T Q
pt022933_POPTR_    M D N T N T N T N H Q P Q S - - - - - - - - - - - - - - - - - - T A Y P P H S T T T T P - - - - - - P - - - - P P P P G
pt027792_POPTR_    M D - - N T T T N H Q P Q P - - - - - - - - - - - - - - - - - - T A Y P T Q S I T T T P - - - - - - P - - - L P P A G G
pt036437_POPTR_    M D - - Q S Q Q T R Q Q Q S - - - - Q Q Q P V V - - - A G A G Q M A Y A S T P Y Q T A P M V A S G T P S I A I P S P T Q
 
AT5G27910.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - N E Q L K S F W S - - - K E M E G N L D F K N H D L P I T R I K
pt000315_POPTR_    P P A T F S N S P H Q L T Y Q Q A Q H F H H - - - Q Q Q Q Q Q L Q M F W T N Q M H E I E Q T T D F K N H S L P L A R I K
pt022933_POPTR_    A P - - - S S A P - - - - - - - - - - F H H - L L Q Q Q Q Q Q L Q M F W S Y Q R Q E I E Q V N D F K N H Q L P L A R I K
pt027792_POPTR_    A P - - - S S T P - - - - - - - - - - F H H - L L Q Q Q Q Q Q L Q M F W S Y Q R Q E I E Q V N D F K N H Q L P L A R I K
pt036437_POPTR_    S P A T F S N S P H Q L T Y Q Q A Q H F H H Q Q Q Q Q Q Q Q Q L Q M F W T I Q M Q E I E Q T T D F K N H S L P L A R I K
 
AT5G27910.1     K I M K Y D P D V T M I A S E A P I L L S K A C E M F I M D L T M R S W L H A Q E S K R V T L Q K S N V D A A V A Q T V
pt000315_POPTR_    K I M K A D E D V R M I S A E A P V I F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I S R T D
pt022933_POPTR_    K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A E E N K R R T L Q K N D I A A A I T R T D
pt027792_POPTR_    K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A E E N K R R T L Q K N D I A A A I T R T D
pt036437_POPTR_    K I M K A D E D V R M I S A E A P V I F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I S R T D
 
AT5G27910.1     I F D F L L D - - - - D D I E V K R E S - - - - - - - - - - V A A A A D - - P V A M - P - - P I D D G E L P P - - - - -
pt000315_POPTR_    V F D F L V D I I P R D - - E L K E E G L G V T K S T I P V V G S P A D - L P Y Y Y V P Q H P V G - - - - P P - - - - -
pt022933_POPTR_    I F D F L V D I V P R D - - E I K E E A A G L G G I - - - - V G A T A S G V P Y Y Y - P - - P M G - - - - Q P A A A A A
pt027792_POPTR_    I F D F L V D I V P R D - - E I K E E A A G L G G I - - - - V G A T A S G V P Y Y Y - P - - P M G - - - - Q P - - A A A
pt036437_POPTR_    V F D F L V D I I P R D - - E L K E E G L G V T K A T I P - V G P P A D - L P Y Y Y V P Q H P V G - - - - P P - - - - -
 
AT5G27910.1     - - G M V I G T P V - - C C S L G I H Q P Q P Q M Q A W P G A W T S V S G E E E E A R G K K G - - G D D G N - - - - - -
pt000315_POPTR_    - - G M I M G N P V D Q A A T Y G A Q Q P R P P - M A F M P W P Q P - Q P Q Q P Q Q R Q S D T - - - - - - - - - - - - -
pt022933_POPTR_    A G G M M I G R P A V D P A T G V Y V Q P - P S - Q A W Q S V W Q T - A A A E D G S Y G S G G A S G G Q G E T - - - - -
pt027792_POPTR_    T G G M M I G R P A M D P A T G V Y V Q P - P S - Q A W Q S V W Q T - A A T E D G S Y G S G G A S G G Q G N L D G Q D Y
pt036437_POPTR_    - - G M I M G K P V D Q A A A Y E A Q Q P Q P P - V A L M P W L Q - - - - T Q P Q Q Q Q S D P - - - - - - - - - - - - -
 
AT5G27910.1     - - - - - - - - -
pt000315_POPTR_    - - - - - - - - -
pt022933_POPTR_    - - - - - - - - -
pt027792_POPTR_    S K W T L P Q L K
pt036437_POPTR_    - - - - - - - - -
 
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