fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G27910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031239 not found in 365aa AT5G63470.2 1st_not 0.403125 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G27910.1     MENNNGNNQLPPKGNEQLKSFWSKEMEGNLDFKNHDLPIT---RIKKIMKYDPDVTMIAS
Sb031239_Sorbi1 -----------------IRSL-SPEHPSNGAQIHHPSPASGHGRARRV-----------P
                                 ::*: * *  .*    :*  * :   * :::           .

AT5G27910.1     EAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLDDDIEVKR
Sb031239_Sorbi1 SAP-------------------------RR--------------------------RVPR
                .**                         :*                          .* *

AT5G27910.1     ESVAAAADPVAMP--PIDDGE--LPPGMVIGTPVCCSLG-----------IHQPQPQM--
Sb031239_Sorbi1 RAVRARAGSRAVPSSPAAAGSPNLAAGRRGGAAAAALLGGAVPRDRGHHRLQEPQPAAGP
                .:* * *.. *:*  *   *.  *..*   *:.... **           :::***    

AT5G27910.1     -------------------------------QAWPGAWTSVSGEE----EEARGKK----
Sb031239_Sorbi1 HQEDHEGRRGRAHDRRRGARRLRPRLRDVHPRAHPPRLGARRGEQAPHPAEVRHRRRRRA
                                               :* *    :  **:     *.* ::    

AT5G27910.1     -------------GGDDGN-----------------------------------------
Sb031239_Sorbi1 HRGLRLPRRHRAAGRGQGSRLRRRHGTSRDPAPRRRPARHRPHGLLLRPAAVTNLASLPW
                             * .:*.                                         

AT5G27910.1     ---------
Sb031239_Sorbi1 SLCGFYLVN
BoxShade v3.31 C (beta, 970507) Output
AT5G27910.1     M E N N N G N N Q L P P K G N E Q L K S F W S K E M E G N L D F K N H D L P I T - - - R I K K I M K Y D P D V T M I A S
Sb031239_Sorbi1    - - - - - - - - - - - - - - - - - I R S L - S P E H P S N G A Q I H H P S P A S G H G R A R R V - - - - - - - - - - - P
 
AT5G27910.1     E A P I L L S K A C E M F I M D L T M R S W L H A Q E S K R V T L Q K S N V D A A V A Q T V I F D F L L D D D I E V K R
Sb031239_Sorbi1    S A P - - - - - - - - - - - - - - - - - - - - - - - - - R R - - - - - - - - - - - - - - - - - - - - - - - - - - R V P R
 
AT5G27910.1     E S V A A A A D P V A M P - - P I D D G E - - L P P G M V I G T P V C C S L G - - - - - - - - - - - I H Q P Q P Q M - -
Sb031239_Sorbi1    R A V R A R A G S R A V P S S P A A A G S P N L A A G R R G G A A A A A L L G G A V P R D R G H H R L Q E P Q P A A G P
 
AT5G27910.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q A W P G A W T S V S G E E - - - - E E A R G K K - - - -
Sb031239_Sorbi1    H Q E D H E G R R G R A H D R R R G A R R L R P R L R D V H P R A H P P R L G A R R G E Q A P H P A E V R H R R R R R A
 
AT5G27910.1     - - - - - - - - - - - - - G G D D G N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031239_Sorbi1    H R G L R L P R R H R A A G R G Q G S R L R R R H G T S R D P A P R R R P A R H R P H G L L L R P A A V T N L A S L P W
 
AT5G27910.1     - - - - - - - - -
Sb031239_Sorbi1    S L C G F Y L V N
 
0