fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G27910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010283 not found in 222aa AT3G48590.1 not_not 0.4375 III
Gm010282 not found in 225aa AT3G48590.1 not_not 0.4375 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G27910.1     MENNNGNNQLPPKG----------------------------NEQLKSFWS---KEMEGN
gm010283_Glyma0 MENNQQQGAQAQSGPYPGGAGGSAGAGAGAGAAPFQHLLQQQQQQLQMFWSYQRQEIEHV
gm010282_Glyma0 MENNQQQGAQAQSGPYPGGAGGSAGAGAGAGAAPFQHLLQQQQQQLQMFWSYQRQEIEHV
                ****: :.  . .*                            ::**: ***   :*:*  

AT5G27910.1     LDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVT
gm010283_Glyma0 NDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHADENKRRT
gm010282_Glyma0 NDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHADENKRRT
                 *****:**::******* * ** **::*****::****:**::**:******:*.** *

AT5G27910.1     LQKSNVDAAVAQTVIFDFLLD----DDIEVKRESVAAAAD--PVAMPPIDDGELPPGMVI
gm010283_Glyma0 LQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQ---PAGMMI
gm010282_Glyma0 LQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQ---PAGMMI
                ***.:: **:::* *****:*    *:*: .   *.*:*.  *   ***.:   *.**:*

AT5G27910.1     GTP-VCCSLGIHQPQPQMQAWPGAWTSVSGEEEEARGKKGGDDGN----
gm010283_Glyma0 GRPAVDPATGVYV-QPPSQAWQSVWQSAAEDTPYGTGAQGNLDGQS---
gm010282_Glyma0 GRPAVDPATGVYV-QPPSQAWQSVWQSAAEDTPYGTGAQGNLDGQSMEF
                * * *  : *::  **  *** ..* *.: :   . * :*. **:
BoxShade v3.31 C (beta, 970507) Output
AT5G27910.1     M E N N N G N N Q L P P K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - N E Q L K S F W S - - - K E M E G N
gm010283_Glyma0    M E N N Q Q Q G A Q A Q S G P Y P G G A G G S A G A G A G A G A A P F Q H L L Q Q Q Q Q Q L Q M F W S Y Q R Q E I E H V
gm010282_Glyma0    M E N N Q Q Q G A Q A Q S G P Y P G G A G G S A G A G A G A G A A P F Q H L L Q Q Q Q Q Q L Q M F W S Y Q R Q E I E H V
 
AT5G27910.1     L D F K N H D L P I T R I K K I M K Y D P D V T M I A S E A P I L L S K A C E M F I M D L T M R S W L H A Q E S K R V T
gm010283_Glyma0    N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A D E N K R R T
gm010282_Glyma0    N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A D E N K R R T
 
AT5G27910.1     L Q K S N V D A A V A Q T V I F D F L L D - - - - D D I E V K R E S V A A A A D - - P V A M P P I D D G E L P P G M V I
gm010283_Glyma0    L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D D A A L V G A T A S G V P Y Y Y P P I G Q - - - P A G M M I
gm010282_Glyma0    L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D D A A L V G A T A S G V P Y Y Y P P I G Q - - - P A G M M I
 
AT5G27910.1     G T P - V C C S L G I H Q P Q P Q M Q A W P G A W T S V S G E E E E A R G K K G G D D G N - - - -
gm010283_Glyma0    G R P A V D P A T G V Y V - Q P P S Q A W Q S V W Q S A A E D T P Y G T G A Q G N L D G Q S - - -
gm010282_Glyma0    G R P A V D P A T G V Y V - Q P P S Q A W Q S V W Q S A A E D T P Y G T G A Q G N L D G Q S M E F
 
0