fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024948 not found in 466aa AT5G28040.1 1st_1st 0.220483641 Ib
Gm008138 not found in 405aa AT5G28040.1 1st_1st 0.376955903 Ib
Pt009727 not found in 413aa AT5G28040.1 1st_1st 0.372688477 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G28040.1     MASDQ-RDTDFSA------ESPDLEEDGGGGGGGRGGGETESD---------EDVVIPE-
gm008138_Glyma0 MASEQ-HDAVFRE------EDMDDDDD-----------ESQED-----------------
pt009727_POPTR_ MAAEQ-DDTVFDQDLEVDDEDEDDQSS-----------QSQNDDLEDDLEIENDDTLPEN
Sb024948_Sorbi1 MADDHPHDAAASSSAGGDEDDEGTDTD-----------ASNSD-----------------
                ** ::  *:          :. . : .            ::.*                 

AT5G28040.1     -----PNEAEDDDHDPDPDPEYEDLNSPSMISRAPATKSSSGTVTVALPAGS--------
gm008138_Glyma0 -----EEYEEDDDEE----------NVPS--------PSTALAVTVAVPGSAVSNGGGGS
pt009727_POPTR_ DDVLSEELLEDDDT------------------------STSAAVPTAIPAVTIA------
Sb024948_Sorbi1 ------------------------------------LANPQGQDPLPFPDAA--------
                                                      ..    . ..*  :        

AT5G28040.1     --AVPVAS-------IPSDSDQ---KWHRMTEIVHQRPP--------------IDDSRRL
gm008138_Glyma0 PISKPTATATTATIVLADSSDP---KRRRLELIEEKKPP------------PPLDDSRRL
pt009727_POPTR_ --SIPAVTTTTTAV--ASDSTPDVLKRQRV-------PPDTTIIPSQDSKKPQFDDTRRL
Sb024948_Sorbi1 --SVPPHPHPLAPAPEPAGAVP---------------PP------QPQPHGPSADDSRRL
                  : *  .        . .:                 **               **:***

AT5G28040.1     FQRLWTDEDEIELLRGFLDYITNHRGN--SSHPPDTAPFYEQIKSKLQLEFNKNQLVEKL
gm008138_Glyma0 FQRLWTDEDEIELLQGFLDY-TSQRGS---SHHNDTALFYDQIKSKLQLDFNKNQLVEKI
pt009727_POPTR_ FQRLWTDEDEIELLQGFLDY-TTTKGTV-NNHHNDTALFYDQIKSKLQLDFNKNQLVEKL
Sb024948_Sorbi1 FQRLWTDEEELLILRGFLDF-TARRGTTFASHQYDTGPFYEEIRRRLSFDFTKSQLIEKL
                ********:*: :*:****: *  :*.   .*  **. **::*: :*.::*.*.**:**:

AT5G28040.1     RRLKKKYRNVMSKFSS-GKEVFFKSPHDQATFDISRKIWNQTGKIIGF---EDNNVMDLE
gm008138_Glyma0 RRLKKKYRNVLNKICS-GKEFSFKSAHDQATFEISRKIWSNVTPV-------GDNSLDDD
pt009727_POPTR_ RRLKKKYRNVLNKINS-GKDFCFKSPHDQATFEISRKIWSSTGKIAGFGNEDGHNLDDDD
Sb024948_Sorbi1 RRLKKKYRVCAARVAAQGAAFAFRSAHEGAIYDVARHIWRPAFRRGEGGGGSAADASDED
                ********    :. : *  . *:*.*: * ::::*:**  .            :  * :

AT5G28040.1     ETNHVNNANGSSGFNVSVIGNANVDVDSENGLEKKVTISRK----RSRSRIGKIDEDKPV
gm008138_Glyma0 EINPSRSPNPNLNFSPVILKN---ETIFRNSTEKKTPK-------RSRPRSAVKIEP---
pt009727_POPTR_ GGNP--NPNPNFNNHNVMMDA---DVAVKIEDQRSTPRSRKR--SRSRPVVGVRTEEKRV
Sb024948_Sorbi1 DINPVAAA----------------AMEDGGGGSASTPTARGRGGRRVRRRTAQELEA-PA
                  *    .                        . ...        * *   .   *    

AT5G28040.1     L------------APCDGVIPNA--------------------------VNLNENVAVGC
gm008138_Glyma0 ---------------NDGSASNRDHNCISNTTPTATAAATNTTAAAAAGTNNN-----NC
pt009727_POPTR_ L-------------MNDGFVGNE--------------------------TNVN-----GG
Sb024948_Sorbi1 LPLPATSALMITDAAEDRLVVAV-ENLVPAIAPPPPLQVPTVSPAAA--TPSP----MPV
                                *                                .          

AT5G28040.1     DFGDGRNLGVLIEETVKNCVSPMIKEMMNSTTGMMMAATGGFPGGGAHALGVLSPMLMPS
gm008138_Glyma0 NSGYGNNIPSLIEETVKSCLSPVLKELMAG-------AMGGGAFG-GRGF-SLNLNPMPF
pt009727_POPTR_ GSGNG-NLSSVIEETMRSCLSPLFKELLSN-------MAGAGMGGVGRGVGGLAMNAMP-
Sb024948_Sorbi1 STGGG-----ATEEAIRSIMSPLLKEFISSVT-----VAGQTGFGLGLGTGFGGIGGFDI
                . * *       **:::. :**::**:: .         *    * . .        :  

AT5G28040.1     MNLGFGGKG-----VGDERWRRQQILELEVYSRRLELVQEQIRATVNELKTMPNGG-
gm008138_Glyma0 MNLSFGGGE-----MVDEKWRKQQILELEVYSKRLELVQDQIKAAMEELRSHGGGGL
pt009727_POPTR_ --LSFGVGDV---MMMDEKWRKQHILELEVYSKRLELVQDQIRAQLDELRSMGV---
Sb024948_Sorbi1 LGLGLGVAGPNPGMPSDDKWRQQQILELEVYLKRIELVREQVTAALEDLRSSEC---
                  *.:*          *::**:*:******* :*:***::*: * :::*::
BoxShade v3.31 C (beta, 970507) Output
AT5G28040.1     M A S D Q - R D T D F S A - - - - - - E S P D L E E D G G G G G G G R G G G E T E S D - - - - - - - - - E D V V I P E -
gm008138_Glyma0    M A S E Q - H D A V F R E - - - - - - E D M D D D D D - - - - - - - - - - - E S Q E D - - - - - - - - - - - - - - - - -
pt009727_POPTR_    M A A E Q - D D T V F D Q D L E V D D E D E D D Q S S - - - - - - - - - - - Q S Q N D D L E D D L E I E N D D T L P E N
Sb024948_Sorbi1    M A D D H P H D A A A S S S A G G D E D D E G T D T D - - - - - - - - - - - A S N S D - - - - - - - - - - - - - - - - -
 
AT5G28040.1     - - - - - P N E A E D D D H D P D P D P E Y E D L N S P S M I S R A P A T K S S S G T V T V A L P A G S - - - - - - - -
gm008138_Glyma0    - - - - - E E Y E E D D D E E - - - - - - - - - - N V P S - - - - - - - - P S T A L A V T V A V P G S A V S N G G G G S
pt009727_POPTR_    D D V L S E E L L E D D D T - - - - - - - - - - - - - - - - - - - - - - - - S T S A A V P T A I P A V T I A - - - - - -
Sb024948_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L A N P Q G Q D P L P F P D A A - - - - - - - -
 
AT5G28040.1     - - A V P V A S - - - - - - - I P S D S D Q - - - K W H R M T E I V H Q R P P - - - - - - - - - - - - - - I D D S R R L
gm008138_Glyma0    P I S K P T A T A T T A T I V L A D S S D P - - - K R R R L E L I E E K K P P - - - - - - - - - - - - P P L D D S R R L
pt009727_POPTR_    - - S I P A V T T T T T A V - - A S D S T P D V L K R Q R V - - - - - - - P P D T T I I P S Q D S K K P Q F D D T R R L
Sb024948_Sorbi1    - - S V P P H P H P L A P A P E P A G A V P - - - - - - - - - - - - - - - P P - - - - - - Q P Q P H G P S A D D S R R L
 
AT5G28040.1     F Q R L W T D E D E I E L L R G F L D Y I T N H R G N - - S S H P P D T A P F Y E Q I K S K L Q L E F N K N Q L V E K L
gm008138_Glyma0    F Q R L W T D E D E I E L L Q G F L D Y - T S Q R G S - - - S H H N D T A L F Y D Q I K S K L Q L D F N K N Q L V E K I
pt009727_POPTR_    F Q R L W T D E D E I E L L Q G F L D Y - T T T K G T V - N N H H N D T A L F Y D Q I K S K L Q L D F N K N Q L V E K L
Sb024948_Sorbi1    F Q R L W T D E E E L L I L R G F L D F - T A R R G T T F A S H Q Y D T G P F Y E E I R R R L S F D F T K S Q L I E K L
 
AT5G28040.1     R R L K K K Y R N V M S K F S S - G K E V F F K S P H D Q A T F D I S R K I W N Q T G K I I G F - - - E D N N V M D L E
gm008138_Glyma0    R R L K K K Y R N V L N K I C S - G K E F S F K S A H D Q A T F E I S R K I W S N V T P V - - - - - - - G D N S L D D D
pt009727_POPTR_    R R L K K K Y R N V L N K I N S - G K D F C F K S P H D Q A T F E I S R K I W S S T G K I A G F G N E D G H N L D D D D
Sb024948_Sorbi1    R R L K K K Y R V C A A R V A A Q G A A F A F R S A H E G A I Y D V A R H I W R P A F R R G E G G G G S A A D A S D E D
 
AT5G28040.1     E T N H V N N A N G S S G F N V S V I G N A N V D V D S E N G L E K K V T I S R K - - - - R S R S R I G K I D E D K P V
gm008138_Glyma0    E I N P S R S P N P N L N F S P V I L K N - - - E T I F R N S T E K K T P K - - - - - - - R S R P R S A V K I E P - - -
pt009727_POPTR_    G G N P - - N P N P N F N N H N V M M D A - - - D V A V K I E D Q R S T P R S R K R - - S R S R P V V G V R T E E K R V
Sb024948_Sorbi1    D I N P V A A A - - - - - - - - - - - - - - - - A M E D G G G G S A S T P T A R G R G G R R V R R R T A Q E L E A - P A
 
AT5G28040.1     L - - - - - - - - - - - - A P C D G V I P N A - - - - - - - - - - - - - - - - - - - - - - - - - - V N L N E N V A V G C
gm008138_Glyma0    - - - - - - - - - - - - - - - N D G S A S N R D H N C I S N T T P T A T A A A T N T T A A A A A G T N N N - - - - - N C
pt009727_POPTR_    L - - - - - - - - - - - - - M N D G F V G N E - - - - - - - - - - - - - - - - - - - - - - - - - - T N V N - - - - - G G
Sb024948_Sorbi1    L P L P A T S A L M I T D A A E D R L V V A V - E N L V P A I A P P P P L Q V P T V S P A A A - - T P S P - - - - M P V
 
AT5G28040.1     D F G D G R N L G V L I E E T V K N C V S P M I K E M M N S T T G M M M A A T G G F P G G G A H A L G V L S P M L M P S
gm008138_Glyma0    N S G Y G N N I P S L I E E T V K S C L S P V L K E L M A G - - - - - - - A M G G G A F G - G R G F - S L N L N P M P F
pt009727_POPTR_    G S G N G - N L S S V I E E T M R S C L S P L F K E L L S N - - - - - - - M A G A G M G G V G R G V G G L A M N A M P -
Sb024948_Sorbi1    S T G G G - - - - - A T E E A I R S I M S P L L K E F I S S V T - - - - - V A G Q T G F G L G L G T G F G G I G G F D I
 
AT5G28040.1     M N L G F G G K G - - - - - V G D E R W R R Q Q I L E L E V Y S R R L E L V Q E Q I R A T V N E L K T M P N G G -
gm008138_Glyma0    M N L S F G G G E - - - - - M V D E K W R K Q Q I L E L E V Y S K R L E L V Q D Q I K A A M E E L R S H G G G G L
pt009727_POPTR_    - - L S F G V G D V - - - M M M D E K W R K Q H I L E L E V Y S K R L E L V Q D Q I R A Q L D E L R S M G V - - -
Sb024948_Sorbi1    L G L G L G V A G P N P G M P S D D K W R Q Q Q I L E L E V Y L K R I E L V R E Q V T A A L E D L R S S E C - - -
 
0