fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009727 not found in 413aa AT5G28040.1 1st_1st 0.372688477 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G28040.1     MASDQRDTDFSAESPDLEEDGGGGGGGRGGGETESDEDVVIPEPNEAEDDDHDPDPD---
pt009727_POPTR_ MAAEQDDTVFDQ---DLEVD-------------DEDED---DQSSQSQNDDLEDDLEIEN
                **::* ** *.    *** *             :.***    :..::::** : * :   

AT5G28040.1     ----PEYEDLNSPSMISRAPATKSSSGTVTVALPAGSAVPVASIP----------SDSDQ
pt009727_POPTR_ DDTLPENDDVLSEELLEDDDT--STSAAVPTAIP---AVTIASIPAVTTTTTAVASDSTP
                    ** :*: * .::.   :  *:*.:*..*:*   **.:****          ***  

AT5G28040.1     ---KWHRM---TEIV----HQRPPIDDSRRLFQRLWTDEDEIELLRGFLDYITNHRGNSS
pt009727_POPTR_ DVLKRQRVPPDTTIIPSQDSKKPQFDDTRRLFQRLWTDEDEIELLQGFLDYTTTKGTVNN
                   * :*:   * *:     ::* :**:*****************:***** *.:   ..

AT5G28040.1     HPPDTAPFYEQIKSKLQLEFNKNQLVEKLRRLKKKYRNVMSKFSSGKEVFFKSPHDQATF
pt009727_POPTR_ HHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKINSGKDFCFKSPHDQATF
                *  *** **:********:********************:.*:.***:. **********

AT5G28040.1     DISRKIWNQTGKIIGF--EDNNVMDLEETNHVNNANGSSGFNV-SVIGNANVDVDSENGL
pt009727_POPTR_ EISRKIWSSTGKIAGFGNEDGHNLDDDDG---GNPNPNPNFNNHNVMMDADVAVKIED--
                :******..**** **  **.: :* ::    .*.* ...**  .*: :*:* *. *:  

AT5G28040.1     EKKVTISRKRSRSR--IGKIDEDKPVLAPCDGVIPNAVNLNENVAVGCDFGDGRNLGVLI
pt009727_POPTR_ QRSTPRSRKRSRSRPVVGVRTEEKRVLMN-DGFVGNETNVN-----GGGSGNG-NLSSVI
                ::... ********  :*   *:* **   **.: * .*:*     * . *:* **. :*

AT5G28040.1     EETVKNCVSPMIKEMMNSTTGMMMAATGGFPGGGAHALGVLSPMLMPSMNLGFGGKGVGD
pt009727_POPTR_ EETMRSCLSPLFKELLSNMAGAGM-------GGVGRGVGGLAMNAMP-LSFGVGDVMMMD
                ***::.*:**::**::.. :*  *       ** .:.:* *:   ** :.:*.*.  : *

AT5G28040.1     ERWRRQQILELEVYSRRLELVQEQIRATVNELKTMPNGG-
pt009727_POPTR_ EKWRKQHILELEVYSKRLELVQDQIRAQLDELRSM---GV
                *:**:*:********:******:**** ::**::*   *
BoxShade v3.31 C (beta, 970507) Output
AT5G28040.1     M A S D Q R D T D F S A E S P D L E E D G G G G G G G R G G G E T E S D E D V V I P E P N E A E D D D H D P D P D - - -
pt009727_POPTR_    M A A E Q D D T V F D Q - - - D L E V D - - - - - - - - - - - - - D E D E D - - - D Q S S Q S Q N D D L E D D L E I E N
 
AT5G28040.1     - - - - P E Y E D L N S P S M I S R A P A T K S S S G T V T V A L P A G S A V P V A S I P - - - - - - - - - - S D S D Q
pt009727_POPTR_    D D T L P E N D D V L S E E L L E D D D T - - S T S A A V P T A I P - - - A V T I A S I P A V T T T T T A V A S D S T P
 
AT5G28040.1     - - - K W H R M - - - T E I V - - - - H Q R P P I D D S R R L F Q R L W T D E D E I E L L R G F L D Y I T N H R G N S S
pt009727_POPTR_    D V L K R Q R V P P D T T I I P S Q D S K K P Q F D D T R R L F Q R L W T D E D E I E L L Q G F L D Y T T T K G T V N N
 
AT5G28040.1     H P P D T A P F Y E Q I K S K L Q L E F N K N Q L V E K L R R L K K K Y R N V M S K F S S G K E V F F K S P H D Q A T F
pt009727_POPTR_    H H N D T A L F Y D Q I K S K L Q L D F N K N Q L V E K L R R L K K K Y R N V L N K I N S G K D F C F K S P H D Q A T F
 
AT5G28040.1     D I S R K I W N Q T G K I I G F - - E D N N V M D L E E T N H V N N A N G S S G F N V - S V I G N A N V D V D S E N G L
pt009727_POPTR_    E I S R K I W S S T G K I A G F G N E D G H N L D D D D G - - - G N P N P N P N F N N H N V M M D A D V A V K I E D - -
 
AT5G28040.1     E K K V T I S R K R S R S R - - I G K I D E D K P V L A P C D G V I P N A V N L N E N V A V G C D F G D G R N L G V L I
pt009727_POPTR_    Q R S T P R S R K R S R S R P V V G V R T E E K R V L M N - D G F V G N E T N V N - - - - - G G G S G N G - N L S S V I
 
AT5G28040.1     E E T V K N C V S P M I K E M M N S T T G M M M A A T G G F P G G G A H A L G V L S P M L M P S M N L G F G G K G V G D
pt009727_POPTR_    E E T M R S C L S P L F K E L L S N M A G A G M - - - - - - - G G V G R G V G G L A M N A M P - L S F G V G D V M M M D
 
AT5G28040.1     E R W R R Q Q I L E L E V Y S R R L E L V Q E Q I R A T V N E L K T M P N G G -
pt009727_POPTR_    E K W R K Q H I L E L E V Y S K R L E L V Q D Q I R A Q L D E L R S M - - - G V
 
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