fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024948 not found in 466aa AT5G28040.1 1st_1st 0.220483641 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G28040.1     MASDQRDTDFSAESPDLEEDGGGGGGGRGGGETESDEDVVIPEPNEAEDDDHDPDPDPEY
Sb024948_Sorbi1 MADDH-PHDAAASS-----SAGGDEDDEGTDTDASNSDLANPQ-------GQDPLPFPDA
                **.*:   * :*.*     ..**. ...* .   *:.*:. *:       .:** * *: 

AT5G28040.1     EDLNSPSMISRAPATKSSSGTVTVALPAGSAVPVASIPSDSDQKWHRMTEIVHQRPPIDD
Sb024948_Sorbi1 ASV-PPHPHPLAPAPE----------PAGAVPPPQPQP---------------HGPSADD
                 .: .*   . ***.:          ***:. *  . *               : *. **

AT5G28040.1     SRRLFQRLWTDEDEIELLRGFLDYITNHRGNS--SHPPDTAPFYEQIKSKLQLEFNKNQL
Sb024948_Sorbi1 SRRLFQRLWTDEEELLILRGFLDF-TARRGTTFASHQYDTGPFYEEIRRRLSFDFTKSQL
                ************:*: :******: * :**.:  **  **.****:*: :*.::*.*.**

AT5G28040.1     VEKLRRLKKKYRNVMSKFSSGKEVF-FKSPHDQATFDISRKIWN---QTGKIIGFEDNNV
Sb024948_Sorbi1 IEKLRRLKKKYRVCAARVAAQGAAFAFRSAHEGAIYDVARHIWRPAFRRGEGGGGSAADA
                :***********   ::.::   .* *:*.*: * :*::*:**.   : *:  * .  :.

AT5G28040.1     MDLEETNHVNNANGSSGFNVSVIGNANVDVDSENGLEKKVTISRKRSRS-----------
Sb024948_Sorbi1 SDEDDINPVAAAAMEDG------GGGSASTPTARGRGGR----RVRRRTAQELEAPALPL
                 * :: * *  *  ..*      *...... : .*   :    * * *:           

AT5G28040.1     ------RIGKIDEDK---------PVLAP-----CDGVIPNAVNLNE-NVAVGCDFGDGR
Sb024948_Sorbi1 PATSALMITDAAEDRLVVAVENLVPAIAPPPPLQVPTVSPAAATPSPMPVSTG-------
                       * .  **:         *.:**        * * *.. .   *:.*       

AT5G28040.1     NLGVLIEETVKNCVSPMIKEMMNST-----TGMMMAATGGFPG-GGAHALGVLSPMLMPS
Sb024948_Sorbi1 --GGATEEAIRSIMSPLLKEFISSVTVAGQTGFGLGLGTGFGGIGGFDILG---------
                  *   **:::. :**::**::.*.     **: :.   ** * ** . **         

AT5G28040.1     MNLGFGGKGVG---DERWRRQQILELEVYSRRLELVQEQIRATVNELKTMPNGG
Sb024948_Sorbi1 LGLGVAGPNPGMPSDDKWRQQQILELEVYLKRIELVREQVTAALEDLRSSEC--
                :.**..* . *   *::**:********* :*:***:**: *::::*::
BoxShade v3.31 C (beta, 970507) Output
AT5G28040.1     M A S D Q R D T D F S A E S P D L E E D G G G G G G G R G G G E T E S D E D V V I P E P N E A E D D D H D P D P D P E Y
Sb024948_Sorbi1    M A D D H - P H D A A A S S - - - - - S A G G D E D D E G T D T D A S N S D L A N P Q - - - - - - - G Q D P L P F P D A
 
AT5G28040.1     E D L N S P S M I S R A P A T K S S S G T V T V A L P A G S A V P V A S I P S D S D Q K W H R M T E I V H Q R P P I D D
Sb024948_Sorbi1    A S V - P P H P H P L A P A P E - - - - - - - - - - P A G A V P P P Q P Q P - - - - - - - - - - - - - - - H G P S A D D
 
AT5G28040.1     S R R L F Q R L W T D E D E I E L L R G F L D Y I T N H R G N S - - S H P P D T A P F Y E Q I K S K L Q L E F N K N Q L
Sb024948_Sorbi1    S R R L F Q R L W T D E E E L L I L R G F L D F - T A R R G T T F A S H Q Y D T G P F Y E E I R R R L S F D F T K S Q L
 
AT5G28040.1     V E K L R R L K K K Y R N V M S K F S S G K E V F - F K S P H D Q A T F D I S R K I W N - - - Q T G K I I G F E D N N V
Sb024948_Sorbi1    I E K L R R L K K K Y R V C A A R V A A Q G A A F A F R S A H E G A I Y D V A R H I W R P A F R R G E G G G G S A A D A
 
AT5G28040.1     M D L E E T N H V N N A N G S S G F N V S V I G N A N V D V D S E N G L E K K V T I S R K R S R S - - - - - - - - - - -
Sb024948_Sorbi1    S D E D D I N P V A A A A M E D G - - - - - - G G G S A S T P T A R G R G G R - - - - R V R R R T A Q E L E A P A L P L
 
AT5G28040.1     - - - - - - R I G K I D E D K - - - - - - - - - P V L A P - - - - - C D G V I P N A V N L N E - N V A V G C D F G D G R
Sb024948_Sorbi1    P A T S A L M I T D A A E D R L V V A V E N L V P A I A P P P P L Q V P T V S P A A A T P S P M P V S T G - - - - - - -
 
AT5G28040.1     N L G V L I E E T V K N C V S P M I K E M M N S T - - - - - T G M M M A A T G G F P G - G G A H A L G V L S P M L M P S
Sb024948_Sorbi1    - - G G A T E E A I R S I M S P L L K E F I S S V T V A G Q T G F G L G L G T G F G G I G G F D I L G - - - - - - - - -
 
AT5G28040.1     M N L G F G G K G V G - - - D E R W R R Q Q I L E L E V Y S R R L E L V Q E Q I R A T V N E L K T M P N G G
Sb024948_Sorbi1    L G L G V A G P N P G M P S D D K W R Q Q Q I L E L E V Y L K R I E L V R E Q V T A A L E D L R S S E C - -
 
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