fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008138 not found in 405aa AT5G28040.1 1st_1st 0.376955903 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G28040.1     MASDQRDTDFSAESPDLEEDGGGGGGGRGGGETESDEDVVIPEPNEAEDDDHDPDPDPEY
gm008138_Glyma0 MASEQHDAVFREEDMDDDDD-----------ESQEDEEY-------EEDDDEENVPSP--
                ***:*:*: *  *. * ::*           *::.**:         ****.:  *.*  

AT5G28040.1     EDLNSPSMISRAPATKSSSGTVTVALPAGSAV-----------PVAS------IPSDSDQ
gm008138_Glyma0 ----------------STALAVTVAVP-GSAVSNGGGGSPISKPTATATTATIVLADSSD
                                *:: :****:* ****           *.*:      : :**.:

AT5G28040.1     KWHRMTEIVHQR---PPIDDSRRLFQRLWTDEDEIELLRGFLDYITNHRGNSSHPPDTAP
gm008138_Glyma0 PKRRRLELIEEKKPPPPLDDSRRLFQRLWTDEDEIELLQGFLDY-TSQRG-SSHHNDTAL
                  :*  *::.::   **:********************:***** *.:** ***  *** 

AT5G28040.1     FYEQIKSKLQLEFNKNQLVEKLRRLKKKYRNVMSKFSSGKEVFFKSPHDQATFDISRKIW
gm008138_Glyma0 FYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKICSGKEFSFKSAHDQATFEISRKIW
                **:********:*********:**********:.*:.****. ***.******:******

AT5G28040.1     NQTGKIIGFEDNNVMDLEETNHVNNANGSSGFNVSVIGNANVDVDSENGLEKKVTISRKR
gm008138_Glyma0 SNVTPV----GDNSLDDDEINPSRSPNPNLNFSPVILKNETI---FRNSTEKK-TPKRSR
                .:.  :    .:* :* :* *  ...* . .*.  :: * .:    .*. *** * .*.*

AT5G28040.1     SRSRIGKIDEDKPVLAPCDGVIPN----------------AVNLNENVAVG-----CDFG
gm008138_Glyma0 PRSAV-KIE-------PNDGSASNRDHNCISNTTPTATAAATNTTAAAAAGTNNNNCNSG
                .** : **:       * **  .*                *.* .  .*.*     *: *

AT5G28040.1     DGRNLGVLIEETVKNCVSPMIKEMMNSTTGMMMAATGGFPGGGAHALGVLSPMLMPSMNL
gm008138_Glyma0 YGNNIPSLIEETVKSCLSPVLKELMAGAMG------GGAFGGRGFSLN-LNP--MPFMNL
                 *.*:  *******.*:**::**:* .: *      **  ** ..:*. *.*  ** ***

AT5G28040.1     GFGGKGVGDERWRRQQILELEVYSRRLELVQEQIRATVNELKTMPNGG-
gm008138_Glyma0 SFGGGEMVDEKWRKQQILELEVYSKRLELVQDQIKAAMEELRSHGGGGL
                .***  : **:**:**********:******:**:*:::**::  .**
BoxShade v3.31 C (beta, 970507) Output
AT5G28040.1     M A S D Q R D T D F S A E S P D L E E D G G G G G G G R G G G E T E S D E D V V I P E P N E A E D D D H D P D P D P E Y
gm008138_Glyma0    M A S E Q H D A V F R E E D M D D D D D - - - - - - - - - - - E S Q E D E E Y - - - - - - - E E D D D E E N V P S P - -
 
AT5G28040.1     E D L N S P S M I S R A P A T K S S S G T V T V A L P A G S A V - - - - - - - - - - - P V A S - - - - - - I P S D S D Q
gm008138_Glyma0    - - - - - - - - - - - - - - - - S T A L A V T V A V P - G S A V S N G G G G S P I S K P T A T A T T A T I V L A D S S D
 
AT5G28040.1     K W H R M T E I V H Q R - - - P P I D D S R R L F Q R L W T D E D E I E L L R G F L D Y I T N H R G N S S H P P D T A P
gm008138_Glyma0    P K R R R L E L I E E K K P P P P L D D S R R L F Q R L W T D E D E I E L L Q G F L D Y - T S Q R G - S S H H N D T A L
 
AT5G28040.1     F Y E Q I K S K L Q L E F N K N Q L V E K L R R L K K K Y R N V M S K F S S G K E V F F K S P H D Q A T F D I S R K I W
gm008138_Glyma0    F Y D Q I K S K L Q L D F N K N Q L V E K I R R L K K K Y R N V L N K I C S G K E F S F K S A H D Q A T F E I S R K I W
 
AT5G28040.1     N Q T G K I I G F E D N N V M D L E E T N H V N N A N G S S G F N V S V I G N A N V D V D S E N G L E K K V T I S R K R
gm008138_Glyma0    S N V T P V - - - - G D N S L D D D E I N P S R S P N P N L N F S P V I L K N E T I - - - F R N S T E K K - T P K R S R
 
AT5G28040.1     S R S R I G K I D E D K P V L A P C D G V I P N - - - - - - - - - - - - - - - - A V N L N E N V A V G - - - - - C D F G
gm008138_Glyma0    P R S A V - K I E - - - - - - - P N D G S A S N R D H N C I S N T T P T A T A A A T N T T A A A A A G T N N N N C N S G
 
AT5G28040.1     D G R N L G V L I E E T V K N C V S P M I K E M M N S T T G M M M A A T G G F P G G G A H A L G V L S P M L M P S M N L
gm008138_Glyma0    Y G N N I P S L I E E T V K S C L S P V L K E L M A G A M G - - - - - - G G A F G G R G F S L N - L N P - - M P F M N L
 
AT5G28040.1     G F G G K G V G D E R W R R Q Q I L E L E V Y S R R L E L V Q E Q I R A T V N E L K T M P N G G -
gm008138_Glyma0    S F G G G E M V D E K W R K Q Q I L E L E V Y S K R L E L V Q D Q I K A A M E E L R S H G G G G L
 
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