fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28770.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027857 not found in 417aa AT5G28770.2 1st_1st 0.410810810 Ia
Pt014161 not found in 399aa AT5G28770.2 1st_1st 0.419819819 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G28770.2     MEKVFSDEEISGNHHWS--------VNGMTSLNRSASEWAFNRFIQESSAAADDGESTTA
gm027857_Glyma1 MDRVFSVDD-ISDHFWPPPPIPVSGANTSSQMSRSASEWAFQRFIQEASASAPSPPSSSS
pt014161_POPTR_ MERVFSVEDNITELFWSPPPPP---PDDLSKMNRSESEWAFERFLQEASACSFSNGTCAT
                *::*** ::   : .*.         :  :.:.** *****:**:**:**.: .  : ::

AT5G28770.2     CGVSV----------------------SSPPNVPVDSEEYRAFLKSKLNLACAAVAMKRG
gm027857_Glyma1 PADVVFVEIDDQPKPTPPPPSHGGVLPSDPGPVALDSEEYQAFLKSKLNLACAAVAMTRG
pt014161_POPTR_ AASSF----------------------AAPAIIPVESDDYHAFLKSKLNLACAAVALTRA
                 .  .                      : *  :.::*::*:***************:.*.

AT5G28770.2     TFIKPQDTSGRSDNGG--ANESEQASLASSKA---------------------TPMMSS-
gm027857_Glyma1 SLAKSQDPSPFSDGGSQPTNPSLVGSQTTSKGSIPSGNDQSKLQDKDINAPVGIPSIPAI
pt014161_POPTR_ SFVKPLDSPAAAESGSQASNTSQLGSHAPSKG---AGYDLPISQDKDANEPLGTPSLPSM
                :: *. *..  ::.*.  :* *  .* :.**.                      * :.: 

AT5G28770.2     ----AIT-------SGSELSGDEEEADGET----NMNPTNVKRVKRMLSNRESARRSRRR
gm027857_Glyma1 QKKPAVAIRPSTSGSSREQS-DDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRR
pt014161_POPTR_ QRKSAVTVKPTTSVSSRELS-EDDENEAETELTENMQPADAKRVRRMLSNRESARRSRSR
                    *::       *. * * :::: :.**    * :*::.***:************* *

AT5G28770.2     KQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEET
gm027857_Glyma1 KQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKVKMAEET
pt014161_POPTR_ KQAHLTELETQVAQLRVENSSLLKSLTDISQKYNESAVDNRVLKADVETLRAKVKMAEET
                *****::*****:*** ***.*:* ***::*.:.:::*:******::*************

AT5G28770.2     VKRLTGFNPMFHNMPQIVSTVSLPSETSNSPDTTSSQVTTP-------------------
gm027857_Glyma1 VKRITGLNPMPHAMSDI-SSLGLPSFDGRSPSDTSADASVPVQDDPHHHFYQPTLNNPIP
pt014161_POPTR_ VKRFTGLNTMFHALPDI-STMSMSSFDG-SPSDT-ADAAVPVKDDPKHHFYKAP-NNPIT
                ***:**:*.* * :.:* *::.:.*  . **. * ::.:.*                   

AT5G28770.2     ------------------EIISSGNK-GKALIGCKMNRTASMRRVESLEHLQKRIRSV--
gm027857_Glyma1 SHD--PIVNNGLGGISSIENVQQQNA-AAVVGGNKIGQTASLQRVASLEHLQKRIRG---
pt014161_POPTR_ THDSRPRGNNVLADISSVENVQPNPVPAAGVSGNKMGRTPSLQRVASLEHLQKRIRGGAS
                                  * :.     .  : * *:.:*.*::** **********.   

AT5G28770.2     -------GDQ--
gm027857_Glyma1 --GPPS--EQ--
pt014161_POPTR_ PCGPQSNGEQAK
                        :*
BoxShade v3.31 C (beta, 970507) Output
AT5G28770.2     M E K V F S D E E I S G N H H W S - - - - - - - - V N G M T S L N R S A S E W A F N R F I Q E S S A A A D D G E S T T A
gm027857_Glyma1    M D R V F S V D D - I S D H F W P P P P I P V S G A N T S S Q M S R S A S E W A F Q R F I Q E A S A S A P S P P S S S S
pt014161_POPTR_    M E R V F S V E D N I T E L F W S P P P P P - - - P D D L S K M N R S E S E W A F E R F L Q E A S A C S F S N G T C A T
 
AT5G28770.2     C G V S V - - - - - - - - - - - - - - - - - - - - - - S S P P N V P V D S E E Y R A F L K S K L N L A C A A V A M K R G
gm027857_Glyma1    P A D V V F V E I D D Q P K P T P P P P S H G G V L P S D P G P V A L D S E E Y Q A F L K S K L N L A C A A V A M T R G
pt014161_POPTR_    A A S S F - - - - - - - - - - - - - - - - - - - - - - A A P A I I P V E S D D Y H A F L K S K L N L A C A A V A L T R A
 
AT5G28770.2     T F I K P Q D T S G R S D N G G - - A N E S E Q A S L A S S K A - - - - - - - - - - - - - - - - - - - - - T P M M S S -
gm027857_Glyma1    S L A K S Q D P S P F S D G G S Q P T N P S L V G S Q T T S K G S I P S G N D Q S K L Q D K D I N A P V G I P S I P A I
pt014161_POPTR_    S F V K P L D S P A A A E S G S Q A S N T S Q L G S H A P S K G - - - A G Y D L P I S Q D K D A N E P L G T P S L P S M
 
AT5G28770.2     - - - - A I T - - - - - - - S G S E L S G D E E E A D G E T - - - - N M N P T N V K R V K R M L S N R E S A R R S R R R
gm027857_Glyma1    Q K K P A V A I R P S T S G S S R E Q S - D D E D I E G E T S M N D N T D P A D V K R V R R M L S N R E S A R R S R R R
pt014161_POPTR_    Q R K S A V T V K P T T S V S S R E L S - E D D E N E A E T E L T E N M Q P A D A K R V R R M L S N R E S A R R S R S R
 
AT5G28770.2     K Q A H L S E L E T Q V S Q L R V E N S K L M K G L T D V T Q T F N D A S V E N R V L K A N I E T L R A K V K M A E E T
gm027857_Glyma1    K Q A H L T D L E T Q V S Q L R G E N S T L L K R L T D V S Q K Y S D S A V D N R V L K A D V E T L R A K V K M A E E T
pt014161_POPTR_    K Q A H L T E L E T Q V A Q L R V E N S S L L K S L T D I S Q K Y N E S A V D N R V L K A D V E T L R A K V K M A E E T
 
AT5G28770.2     V K R L T G F N P M F H N M P Q I V S T V S L P S E T S N S P D T T S S Q V T T P - - - - - - - - - - - - - - - - - - -
gm027857_Glyma1    V K R I T G L N P M P H A M S D I - S S L G L P S F D G R S P S D T S A D A S V P V Q D D P H H H F Y Q P T L N N P I P
pt014161_POPTR_    V K R F T G L N T M F H A L P D I - S T M S M S S F D G - S P S D T - A D A A V P V K D D P K H H F Y K A P - N N P I T
 
AT5G28770.2     - - - - - - - - - - - - - - - - - - E I I S S G N K - G K A L I G C K M N R T A S M R R V E S L E H L Q K R I R S V - -
gm027857_Glyma1    S H D - - P I V N N G L G G I S S I E N V Q Q Q N A - A A V V G G N K I G Q T A S L Q R V A S L E H L Q K R I R G - - -
pt014161_POPTR_    T H D S R P R G N N V L A D I S S V E N V Q P N P V P A A G V S G N K M G R T P S L Q R V A S L E H L Q K R I R G G A S
 
AT5G28770.2     - - - - - - - G D Q - -
gm027857_Glyma1    - - G P P S - - E Q - -
pt014161_POPTR_    P C G P Q S N G E Q A K
 
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