fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28770.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014161 not found in 399aa AT5G28770.2 1st_1st 0.419819819 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G28770.2     MEKVFSDEEISGNHHWS-----VNGMTSLNRSASEWAFNRFIQESSAAA-DDGESTTACG
pt014161_POPTR_ MERVFSVEDNITELFWSPPPPPPDDLSKMNRSESEWAFERFLQEASACSFSNGTCATAAS
                **:*** *:   : .**      :.::.:*** *****:**:**:**.: .:* .:**..

AT5G28770.2     VSVSSPPNVPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQ
pt014161_POPTR_ -SFAAPAIIPVESDDYHAFLKSKLNLACAAVALTRASFVKPLDSPAAAESGSQASNTSQL
                 *.::*. :**:*::*:***************:.*.:*:** *:.. ::.*  .:* *: 

AT5G28770.2     ASLASSK------------------ATPMM-----SSAIT-------SGSELSGDEE-EA
pt014161_POPTR_ GSHAPSKGAGYDLPISQDKDANEPLGTPSLPSMQRKSAVTVKPTTSVSSRELSEDDENEA
                .* *.**                  .** :     .**:*       *. *** *:* **

AT5G28770.2     DGE--TNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTD
pt014161_POPTR_ ETELTENMQPADAKRVRRMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKSLTD
                : *   **:*::.***:************* ******:******:*******.*:*.***

AT5G28770.2     VTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSLPSETS
pt014161_POPTR_ ISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRFTGLNTMFHALPDI-STMSMSSFDG
                ::*.:*:::*:******::****************:**:*.*** :*:* **:*:.*  .

AT5G28770.2     NSPDTTSSQV------------------TTPEIISSGNKGKALI----------------
pt014161_POPTR_ SPSDTADAAVPVKDDPKHHFYKAPNNPITTHDSRPRGNNVLADISSVENVQPNPVPAAGV
                ...**:.: *                  ** :  . **:  * *                

AT5G28770.2     -GCKMNRTASMRRVESLEHLQKRIR---------SVGDQ--
pt014161_POPTR_ SGNKMGRTPSLQRVASLEHLQKRIRGGASPCGPQSNGEQAK
                 * **.**.*::** **********         * *:*
BoxShade v3.31 C (beta, 970507) Output
AT5G28770.2     M E K V F S D E E I S G N H H W S - - - - - V N G M T S L N R S A S E W A F N R F I Q E S S A A A - D D G E S T T A C G
pt014161_POPTR_    M E R V F S V E D N I T E L F W S P P P P P P D D L S K M N R S E S E W A F E R F L Q E A S A C S F S N G T C A T A A S
 
AT5G28770.2     V S V S S P P N V P V D S E E Y R A F L K S K L N L A C A A V A M K R G T F I K P Q D T S G R S D N G - - G A N E S E Q
pt014161_POPTR_    - S F A A P A I I P V E S D D Y H A F L K S K L N L A C A A V A L T R A S F V K P L D S P A A A E S G S Q A S N T S Q L
 
AT5G28770.2     A S L A S S K - - - - - - - - - - - - - - - - - - A T P M M - - - - - S S A I T - - - - - - - S G S E L S G D E E - E A
pt014161_POPTR_    G S H A P S K G A G Y D L P I S Q D K D A N E P L G T P S L P S M Q R K S A V T V K P T T S V S S R E L S E D D E N E A
 
AT5G28770.2     D G E - - T N M N P T N V K R V K R M L S N R E S A R R S R R R K Q A H L S E L E T Q V S Q L R V E N S K L M K G L T D
pt014161_POPTR_    E T E L T E N M Q P A D A K R V R R M L S N R E S A R R S R S R K Q A H L T E L E T Q V A Q L R V E N S S L L K S L T D
 
AT5G28770.2     V T Q T F N D A S V E N R V L K A N I E T L R A K V K M A E E T V K R L T G F N P M F H N M P Q I V S T V S L P S E T S
pt014161_POPTR_    I S Q K Y N E S A V D N R V L K A D V E T L R A K V K M A E E T V K R F T G L N T M F H A L P D I - S T M S M S S F D G
 
AT5G28770.2     N S P D T T S S Q V - - - - - - - - - - - - - - - - - - T T P E I I S S G N K G K A L I - - - - - - - - - - - - - - - -
pt014161_POPTR_    S P S D T A D A A V P V K D D P K H H F Y K A P N N P I T T H D S R P R G N N V L A D I S S V E N V Q P N P V P A A G V
 
AT5G28770.2     - G C K M N R T A S M R R V E S L E H L Q K R I R - - - - - - - - - S V G D Q - -
pt014161_POPTR_    S G N K M G R T P S L Q R V A S L E H L Q K R I R G G A S P C G P Q S N G E Q A K
 
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