Input
| Putative repression domain
|
|
AT5G28770.2 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt014161 |
not found in 399aa |
AT5G28770.2 |
1st_1st |
0.419819819 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G28770.2 MEKVFSDEEISGNHHWS-----VNGMTSLNRSASEWAFNRFIQESSAAA-DDGESTTACG
pt014161_POPTR_ MERVFSVEDNITELFWSPPPPPPDDLSKMNRSESEWAFERFLQEASACSFSNGTCATAAS
**:*** *: : .** :.::.:*** *****:**:**:**.: .:* .:**..
AT5G28770.2 VSVSSPPNVPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQ
pt014161_POPTR_ -SFAAPAIIPVESDDYHAFLKSKLNLACAAVALTRASFVKPLDSPAAAESGSQASNTSQL
*.::*. :**:*::*:***************:.*.:*:** *:.. ::.* .:* *:
AT5G28770.2 ASLASSK------------------ATPMM-----SSAIT-------SGSELSGDEE-EA
pt014161_POPTR_ GSHAPSKGAGYDLPISQDKDANEPLGTPSLPSMQRKSAVTVKPTTSVSSRELSEDDENEA
.* *.** .** : .**:* *. *** *:* **
AT5G28770.2 DGE--TNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTD
pt014161_POPTR_ ETELTENMQPADAKRVRRMLSNRESARRSRSRKQAHLTELETQVAQLRVENSSLLKSLTD
: * **:*::.***:************* ******:******:*******.*:*.***
AT5G28770.2 VTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSLPSETS
pt014161_POPTR_ ISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRFTGLNTMFHALPDI-STMSMSSFDG
::*.:*:::*:******::****************:**:*.*** :*:* **:*:.* .
AT5G28770.2 NSPDTTSSQV------------------TTPEIISSGNKGKALI----------------
pt014161_POPTR_ SPSDTADAAVPVKDDPKHHFYKAPNNPITTHDSRPRGNNVLADISSVENVQPNPVPAAGV
...**:.: * ** : . **: * *
AT5G28770.2 -GCKMNRTASMRRVESLEHLQKRIR---------SVGDQ--
pt014161_POPTR_ SGNKMGRTPSLQRVASLEHLQKRIRGGASPCGPQSNGEQAK
* **.**.*::** ********** * *:*
BoxShade v3.31 C (beta, 970507) Output
AT5G28770.2 |
M |
E |
K |
V |
F |
S |
D |
E |
E |
I |
S |
G |
N |
H |
H |
W |
S |
- |
- |
- |
- |
- |
V |
N |
G |
M |
T |
S |
L |
N |
R |
S |
A |
S |
E |
W |
A |
F |
N |
R |
F |
I |
Q |
E |
S |
S |
A |
A |
A |
- |
D |
D |
G |
E |
S |
T |
T |
A |
C |
G |
pt014161_POPTR_ |
M |
E |
R |
V |
F |
S |
V |
E |
D |
N |
I |
T |
E |
L |
F |
W |
S |
P |
P |
P |
P |
P |
P |
D |
D |
L |
S |
K |
M |
N |
R |
S |
E |
S |
E |
W |
A |
F |
E |
R |
F |
L |
Q |
E |
A |
S |
A |
C |
S |
F |
S |
N |
G |
T |
C |
A |
T |
A |
A |
S |
|
AT5G28770.2 |
V |
S |
V |
S |
S |
P |
P |
N |
V |
P |
V |
D |
S |
E |
E |
Y |
R |
A |
F |
L |
K |
S |
K |
L |
N |
L |
A |
C |
A |
A |
V |
A |
M |
K |
R |
G |
T |
F |
I |
K |
P |
Q |
D |
T |
S |
G |
R |
S |
D |
N |
G |
- |
- |
G |
A |
N |
E |
S |
E |
Q |
pt014161_POPTR_ |
- |
S |
F |
A |
A |
P |
A |
I |
I |
P |
V |
E |
S |
D |
D |
Y |
H |
A |
F |
L |
K |
S |
K |
L |
N |
L |
A |
C |
A |
A |
V |
A |
L |
T |
R |
A |
S |
F |
V |
K |
P |
L |
D |
S |
P |
A |
A |
A |
E |
S |
G |
S |
Q |
A |
S |
N |
T |
S |
Q |
L |
|
AT5G28770.2 |
A |
S |
L |
A |
S |
S |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
T |
P |
M |
M |
- |
- |
- |
- |
- |
S |
S |
A |
I |
T |
- |
- |
- |
- |
- |
- |
- |
S |
G |
S |
E |
L |
S |
G |
D |
E |
E |
- |
E |
A |
pt014161_POPTR_ |
G |
S |
H |
A |
P |
S |
K |
G |
A |
G |
Y |
D |
L |
P |
I |
S |
Q |
D |
K |
D |
A |
N |
E |
P |
L |
G |
T |
P |
S |
L |
P |
S |
M |
Q |
R |
K |
S |
A |
V |
T |
V |
K |
P |
T |
T |
S |
V |
S |
S |
R |
E |
L |
S |
E |
D |
D |
E |
N |
E |
A |
|
AT5G28770.2 |
D |
G |
E |
- |
- |
T |
N |
M |
N |
P |
T |
N |
V |
K |
R |
V |
K |
R |
M |
L |
S |
N |
R |
E |
S |
A |
R |
R |
S |
R |
R |
R |
K |
Q |
A |
H |
L |
S |
E |
L |
E |
T |
Q |
V |
S |
Q |
L |
R |
V |
E |
N |
S |
K |
L |
M |
K |
G |
L |
T |
D |
pt014161_POPTR_ |
E |
T |
E |
L |
T |
E |
N |
M |
Q |
P |
A |
D |
A |
K |
R |
V |
R |
R |
M |
L |
S |
N |
R |
E |
S |
A |
R |
R |
S |
R |
S |
R |
K |
Q |
A |
H |
L |
T |
E |
L |
E |
T |
Q |
V |
A |
Q |
L |
R |
V |
E |
N |
S |
S |
L |
L |
K |
S |
L |
T |
D |
|
AT5G28770.2 |
V |
T |
Q |
T |
F |
N |
D |
A |
S |
V |
E |
N |
R |
V |
L |
K |
A |
N |
I |
E |
T |
L |
R |
A |
K |
V |
K |
M |
A |
E |
E |
T |
V |
K |
R |
L |
T |
G |
F |
N |
P |
M |
F |
H |
N |
M |
P |
Q |
I |
V |
S |
T |
V |
S |
L |
P |
S |
E |
T |
S |
pt014161_POPTR_ |
I |
S |
Q |
K |
Y |
N |
E |
S |
A |
V |
D |
N |
R |
V |
L |
K |
A |
D |
V |
E |
T |
L |
R |
A |
K |
V |
K |
M |
A |
E |
E |
T |
V |
K |
R |
F |
T |
G |
L |
N |
T |
M |
F |
H |
A |
L |
P |
D |
I |
- |
S |
T |
M |
S |
M |
S |
S |
F |
D |
G |
|
AT5G28770.2 |
N |
S |
P |
D |
T |
T |
S |
S |
Q |
V |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
T |
P |
E |
I |
I |
S |
S |
G |
N |
K |
G |
K |
A |
L |
I |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt014161_POPTR_ |
S |
P |
S |
D |
T |
A |
D |
A |
A |
V |
P |
V |
K |
D |
D |
P |
K |
H |
H |
F |
Y |
K |
A |
P |
N |
N |
P |
I |
T |
T |
H |
D |
S |
R |
P |
R |
G |
N |
N |
V |
L |
A |
D |
I |
S |
S |
V |
E |
N |
V |
Q |
P |
N |
P |
V |
P |
A |
A |
G |
V |
|
AT5G28770.2 |
- |
G |
C |
K |
M |
N |
R |
T |
A |
S |
M |
R |
R |
V |
E |
S |
L |
E |
H |
L |
Q |
K |
R |
I |
R |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
V |
G |
D |
Q |
- |
- |
pt014161_POPTR_ |
S |
G |
N |
K |
M |
G |
R |
T |
P |
S |
L |
Q |
R |
V |
A |
S |
L |
E |
H |
L |
Q |
K |
R |
I |
R |
G |
G |
A |
S |
P |
C |
G |
P |
Q |
S |
N |
G |
E |
Q |
A |
K |
|
|