fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28770.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020047 not found in 517aa AT5G28770.2 1st_1st 0.288288288 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G28770.2     --------MEKVFSDEEISGNHHW---------------------SVNGMTSLNRSASEW
Sb020047_Sorbi1 RRDPARSGMERVFSVEEIP-NPYWAPPHPQSAAAGAVAAPGGGGGAVDAAGAMNRCPSEW
                        **:*** ***. * :*                     :*:.  ::**..***

AT5G28770.2     AFNRFIQESSAAADD-------GESTTACGVSVSSPPNVP----------VDSEEYRAFL
Sb020047_Sorbi1 YFQKFLEE--AVLDSPGPVPGVGRGSVVAG--AEAPESKPLGPAAASSSVVDPVEYNAML
                 *::*::*  *. *.       *..:...*  ..:* . *          **. **.*:*

AT5G28770.2     KSKLNLACAAVAMKRGTFIKPQDTSGRSDN---------------GGANESEQASLASSK
Sb020047_Sorbi1 KQKLEKDLAAVAMWRASGAAPPDRSAVASSLPSVDVPHAAPLKPIGGTESLVQNKLAGAP
                *.**:   ***** *.:   * * *. :..               **::.  * .**.: 

AT5G28770.2     AT------------PMMSSAITSGSELSGDEE-EADGET--NMNPTNVKRVKRMLSNRES
Sb020047_Sorbi1 GVGSGPHVVQTADIPIKQTTSSSSREQSDDDDMEGDAETTGNANPVQQRLQRRKQSNRES
                ..            *: .:: :*. * *.*:: *.*.**  * **.: :  :*  *****

AT5G28770.2     ARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAK
Sb020047_Sorbi1 ARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVNQKFNEAAVDNRVLKADVETLRAK
                ***** ** ***.***:**:*******.*:: *:**.*.**:*:*:******::******

AT5G28770.2     VKMAEETVKRLTGFNPMFHNMPQI--VSTVSLPSETSNSPDTTSSQVT------------
Sb020047_Sorbi1 VKMAEDSVKRVTGMNALF---PAVSDMSSLSMPFNGSPTDSTSDAAVPIQDDPNSYFANP
                *****::***:**:*.:*   * :  :*::*:* : * : .*:.: *.            

AT5G28770.2     ---------TPEIISSGNKGKALI---GCKMNRTASMRRVESLEHLQKRI----RSVGDQ
Sb020047_Sorbi1 SEIGGNNGYMPDIASSVQEDDNFVNGAAGKMGRTASLQRVASLEHLQKRMCGGPASSGST
                          *:* ** ::.. ::   . **.****::** ********:     * *. 

AT5G28770.2     -
Sb020047_Sorbi1 S
BoxShade v3.31 C (beta, 970507) Output
AT5G28770.2     - - - - - - - - M E K V F S D E E I S G N H H W - - - - - - - - - - - - - - - - - - - - - S V N G M T S L N R S A S E W
Sb020047_Sorbi1    R R D P A R S G M E R V F S V E E I P - N P Y W A P P H P Q S A A A G A V A A P G G G G G A V D A A G A M N R C P S E W
 
AT5G28770.2     A F N R F I Q E S S A A A D D - - - - - - - G E S T T A C G V S V S S P P N V P - - - - - - - - - - V D S E E Y R A F L
Sb020047_Sorbi1    Y F Q K F L E E - - A V L D S P G P V P G V G R G S V V A G - - A E A P E S K P L G P A A A S S S V V D P V E Y N A M L
 
AT5G28770.2     K S K L N L A C A A V A M K R G T F I K P Q D T S G R S D N - - - - - - - - - - - - - - - G G A N E S E Q A S L A S S K
Sb020047_Sorbi1    K Q K L E K D L A A V A M W R A S G A A P P D R S A V A S S L P S V D V P H A A P L K P I G G T E S L V Q N K L A G A P
 
AT5G28770.2     A T - - - - - - - - - - - - P M M S S A I T S G S E L S G D E E - E A D G E T - - N M N P T N V K R V K R M L S N R E S
Sb020047_Sorbi1    G V G S G P H V V Q T A D I P I K Q T T S S S S R E Q S D D D D M E G D A E T T G N A N P V Q Q R L Q R R K Q S N R E S
 
AT5G28770.2     A R R S R R R K Q A H L S E L E T Q V S Q L R V E N S K L M K G L T D V T Q T F N D A S V E N R V L K A N I E T L R A K
Sb020047_Sorbi1    A R R S R S R K A A H L N E L E A Q V A Q L R V E N S S L L R R L A D V N Q K F N E A A V D N R V L K A D V E T L R A K
 
AT5G28770.2     V K M A E E T V K R L T G F N P M F H N M P Q I - - V S T V S L P S E T S N S P D T T S S Q V T - - - - - - - - - - - -
Sb020047_Sorbi1    V K M A E D S V K R V T G M N A L F - - - P A V S D M S S L S M P F N G S P T D S T S D A A V P I Q D D P N S Y F A N P
 
AT5G28770.2     - - - - - - - - - T P E I I S S G N K G K A L I - - - G C K M N R T A S M R R V E S L E H L Q K R I - - - - R S V G D Q
Sb020047_Sorbi1    S E I G G N N G Y M P D I A S S V Q E D D N F V N G A A G K M G R T A S L Q R V A S L E H L Q K R M C G G P A S S G S T
 
AT5G28770.2     -
Sb020047_Sorbi1    S
 
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