fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G28770.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027857 not found in 417aa AT5G28770.2 1st_1st 0.410810810 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G28770.2     MEKVFSDEEISGNHHW--------SVNGMTSLNRSASEWAFNRFIQESSAAADDGESTTA
gm027857_Glyma1 MDRVFSVDDIS-DHFWPPPPIPVSGANTSSQMSRSASEWAFQRFIQEASASAPSPPSSSS
                *::*** ::** :*.*        ..*  :.:.********:*****:**:* .  *:::

AT5G28770.2     ----------------------CGVSVSSPPNVPVDSEEYRAFLKSKLNLACAAVAMKRG
gm027857_Glyma1 PADVVFVEIDDQPKPTPPPPSHGGVLPSDPGPVALDSEEYQAFLKSKLNLACAAVAMTRG
                                       **  *.*  *.:*****:****************.**

AT5G28770.2     TFIKPQDTSGRSDNGG--ANESEQASLASSKAT-----------------PMMSSAI---
gm027857_Glyma1 SLAKSQDPSPFSDGGSQPTNPSLVGSQTTSKGSIPSGNDQSKLQDKDINAPVGIPSIPAI
                :: *.**.*  **.*.  :* *  .* ::**.:                 *:  .:*   

AT5G28770.2     -----------TSGSEL-SGDEEEADGETNMN----PTNVKRVKRMLSNRESARRSRRRK
gm027857_Glyma1 QKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRK
                           ****.  ..*:*: :***.**    *::****:****************

AT5G28770.2     QAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETV
gm027857_Glyma1 QAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKVKMAEETV
                ****::********* ***.*:* ****:*.:.*::*:******::**************

AT5G28770.2     KRLTGFNPMFHNMPQIVSTVSLPSETSNSPDTTSSQVTTP--------------------
gm027857_Glyma1 KRITGLNPMPHAMSDI-SSLGLPSFDGRSPSDTSADASVPVQDDPHHHFYQPTLNNPIPS
                **:**:*** * *.:* *::.***  ..**. **::.:.*                    

AT5G28770.2     --EIISSG-------------NKGKALIGCKMNRTASMRRVESLEHLQKRIRS--VGDQ
gm027857_Glyma1 HDPIVNNGLGGISSIENVQQQNAAAVVGGNKIGQTASLQRVASLEHLQKRIRGGPPSEQ
                   *:..*             * . .: * *:.:***::** **********.   .:*
BoxShade v3.31 C (beta, 970507) Output
AT5G28770.2     M E K V F S D E E I S G N H H W - - - - - - - - S V N G M T S L N R S A S E W A F N R F I Q E S S A A A D D G E S T T A
gm027857_Glyma1    M D R V F S V D D I S - D H F W P P P P I P V S G A N T S S Q M S R S A S E W A F Q R F I Q E A S A S A P S P P S S S S
 
AT5G28770.2     - - - - - - - - - - - - - - - - - - - - - - C G V S V S S P P N V P V D S E E Y R A F L K S K L N L A C A A V A M K R G
gm027857_Glyma1    P A D V V F V E I D D Q P K P T P P P P S H G G V L P S D P G P V A L D S E E Y Q A F L K S K L N L A C A A V A M T R G
 
AT5G28770.2     T F I K P Q D T S G R S D N G G - - A N E S E Q A S L A S S K A T - - - - - - - - - - - - - - - - - P M M S S A I - - -
gm027857_Glyma1    S L A K S Q D P S P F S D G G S Q P T N P S L V G S Q T T S K G S I P S G N D Q S K L Q D K D I N A P V G I P S I P A I
 
AT5G28770.2     - - - - - - - - - - - T S G S E L - S G D E E E A D G E T N M N - - - - P T N V K R V K R M L S N R E S A R R S R R R K
gm027857_Glyma1    Q K K P A V A I R P S T S G S S R E Q S D D E D I E G E T S M N D N T D P A D V K R V R R M L S N R E S A R R S R R R K
 
AT5G28770.2     Q A H L S E L E T Q V S Q L R V E N S K L M K G L T D V T Q T F N D A S V E N R V L K A N I E T L R A K V K M A E E T V
gm027857_Glyma1    Q A H L T D L E T Q V S Q L R G E N S T L L K R L T D V S Q K Y S D S A V D N R V L K A D V E T L R A K V K M A E E T V
 
AT5G28770.2     K R L T G F N P M F H N M P Q I V S T V S L P S E T S N S P D T T S S Q V T T P - - - - - - - - - - - - - - - - - - - -
gm027857_Glyma1    K R I T G L N P M P H A M S D I - S S L G L P S F D G R S P S D T S A D A S V P V Q D D P H H H F Y Q P T L N N P I P S
 
AT5G28770.2     - - E I I S S G - - - - - - - - - - - - - N K G K A L I G C K M N R T A S M R R V E S L E H L Q K R I R S - - V G D Q
gm027857_Glyma1    H D P I V N N G L G G I S S I E N V Q Q Q N A A A V V G G N K I G Q T A S L Q R V A S L E H L Q K R I R G G P P S E Q
 
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