fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G29000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015712 not found in 431aa AT5G29000.2 1st_not 0.413513513 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G29000.1     -MNNPVPCQ--SVSGGN-SGGYLFPSSSGYCN---VSAVLPHGRNLQNQPPVSTVPRDR-
pt015712_POPTR_ MMRNSASQQASSLSPGNRSVGPLFSSSSRFSNDMHVSSVSPQGRQSHNSPFISQSLRDRG
                 *.*... *  *:* ** * * **.*** :.*   **:* *:**: :*.* :*   *** 

AT5G29000.1     ---------LAMQDCPLIAQSSLINHHPQEFIDPLHEFFDFSDHVPVQNLQAESSGVRVD
pt015712_POPTR_ NFTPTHDSHSEVQSTEFIAYSDE-NKDLSWPVDPLQDLLDFAGNVHVQNGQVESSA-GVF
                           :*.  :** *.  *:. .  :***::::**:.:* *** *.***.  * 

AT5G29000.1     SSVELHKKSEWQDWADQLISVDDGSEPNWSELLGD-SSSHNPNSEI-PTPFLDVPRLDIT
pt015712_POPTR_ ASEDHAKRTDWQEWADQLISVDDELEPNWSEILNDVNKTDSRQKELKPSPNISVKQPPI-
                :* :  *:::**:**********  ******:*.* ..:.. :.*: *:* :.* :  * 

AT5G29000.1     ANQQQQMVSSEDQLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLK
pt015712_POPTR_ --HQHQTAHSGEVCAVANPLSAAPTTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLK
                  :*:* . * :  :  *. *:..*:* ****************************.***

AT5G29000.1     LLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQA
pt015712_POPTR_ HMNVEGLTIYHVKSHLQKYRSARYKPESSD------EKKTSPIEEMKSLDLKTSMGITEA
                 :*  ***************:******:*:      *** :.**::****:***: **:*

AT5G29000.1     LRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDNK-----SSSSEASPK
pt015712_POPTR_ LRLQMEVQKRLHEQLEIQRNLQLRIEEQGRHLQEMFEKQRKIEDDKSKAPSSSQDDPSPL
                *******************.***:**:***:** *****:**:*:*     **..:.** 

AT5G29000.1     QCNGSFAEVEVGLET----LTGDQNESA-------SASR---------------------
pt015712_POPTR_ QAKLEQSSANYKLEASELDLVKTSNESALLEESSQSISRKQKAPEERNDQVLDQIDEESS
                *.: . :..:  **:    *.  .****       * **                     

AT5G29000.1     ----KRVRED------------
pt015712_POPTR_ PAPIKRPRRDETAELSTGAASN
                    ** *.*
BoxShade v3.31 C (beta, 970507) Output
AT5G29000.1     - M N N P V P C Q - - S V S G G N - S G G Y L F P S S S G Y C N - - - V S A V L P H G R N L Q N Q P P V S T V P R D R -
pt015712_POPTR_    M M R N S A S Q Q A S S L S P G N R S V G P L F S S S S R F S N D M H V S S V S P Q G R Q S H N S P F I S Q S L R D R G
 
AT5G29000.1     - - - - - - - - - L A M Q D C P L I A Q S S L I N H H P Q E F I D P L H E F F D F S D H V P V Q N L Q A E S S G V R V D
pt015712_POPTR_    N F T P T H D S H S E V Q S T E F I A Y S D E - N K D L S W P V D P L Q D L L D F A G N V H V Q N G Q V E S S A - G V F
 
AT5G29000.1     S S V E L H K K S E W Q D W A D Q L I S V D D G S E P N W S E L L G D - S S S H N P N S E I - P T P F L D V P R L D I T
pt015712_POPTR_    A S E D H A K R T D W Q E W A D Q L I S V D D E L E P N W S E I L N D V N K T D S R Q K E L K P S P N I S V K Q P P I -
 
AT5G29000.1     A N Q Q Q Q M V S S E D Q L S G R N S S S S V A T S K Q R M R W T P E L H E A F V E A V N Q L G G S E R A T P K A V L K
pt015712_POPTR_    - - H Q H Q T A H S G E V C A V A N P L S A A P T T K P R M R W T P E L H E A F V E A V N Q L G G S E R A T P K G V L K
 
AT5G29000.1     L L N N P G L T I Y H V K S H L Q K Y R T A R Y K P E T S E V T G E P Q E K K M T S I E D I K S L D M K T S V E I T Q A
pt015712_POPTR_    H M N V E G L T I Y H V K S H L Q K Y R S A R Y K P E S S D - - - - - - E K K T S P I E E M K S L D L K T S M G I T E A
 
AT5G29000.1     L R L Q M E V Q K R L H E Q L E I Q R S L Q L Q I E K Q G R Y L Q M M F E K Q Q K I Q D N K - - - - - S S S S E A S P K
pt015712_POPTR_    L R L Q M E V Q K R L H E Q L E I Q R N L Q L R I E E Q G R H L Q E M F E K Q R K I E D D K S K A P S S S Q D D P S P L
 
AT5G29000.1     Q C N G S F A E V E V G L E T - - - - L T G D Q N E S A - - - - - - - S A S R - - - - - - - - - - - - - - - - - - - - -
pt015712_POPTR_    Q A K L E Q S S A N Y K L E A S E L D L V K T S N E S A L L E E S S Q S I S R K Q K A P E E R N D Q V L D Q I D E E S S
 
AT5G29000.1     - - - - K R V R E D - - - - - - - - - - - -
pt015712_POPTR_    P A P I K R P R R D E T A E L S T G A A S N
 
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