fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G29000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012929 not found in 436aa AT3G04450.1 not_not 0.409459459 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G29000.1     -MNNPVPCQS---VSGGNSGGYLFPSSSGYCN---VSAVLPHGRNLQNQPPVSTVPRDRL
pt012929_POPTR_ MIRNPASQQASPLSSGNGSVGHLVSSSSRFTNDMSVSAVSPQGKQSHNSPFISQSLRDG-
                 :.**.. *:    **..* *:*..*** : *   **** *:*:: :*.* :*   **  

AT5G29000.1     AMQDCPLIAQS-------SLINHH--------PQEFIDPLHEFFDFSDHVPVQNLQAESS
pt012929_POPTR_ --GNFPPTHYSHSEGQSTAFINHSDDNKGLSWP---IDPLQEFINFVENVPVQNGQVEST
                   : *    *       ::***         *   ****:**::* ::***** *.**:

AT5G29000.1     GVRVDSSVELHKKSEWQDWADQLISVDDGSEPNWSELLGDSSSHN-------PNSEIPTP
pt012929_POPTR_ A-GVIASEDHAKRTDWQEWADQLISVDDELEPNWSEILNDVNMKDSKQKMLSPNNSVQQP
                .  * :* :  *:::**:**********  ******:*.* . ::       **..:  *

AT5G29000.1     FLDVPRLDITANQQQQMVSSEDQLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGS
pt012929_POPTR_ LI----------HQHQTAHSGEVCAVTNPLLAAPPTKSRMRWTPELHEAFVEAVNQLGGS
                ::          :*:* . * :  :  *.  :...:*.**********************

AT5G29000.1     ERATPKAVLKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLD
pt012929_POPTR_ ERATPKGVLKQMNVEGLTIYHVKSHLQKYRTARYKPESSEGT---SEKKLSPVEEMKSLD
                ******.*** :*  **********************:** *   .***::.:*::****

AT5G29000.1     MKTSVEITQALRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDNKS---
pt012929_POPTR_ LKTSMEISEALRLQMEVQKQLHEQLEIQRNLQLRIEEQGRYLQEMFEKQKKMEGDRSKAP
                :***:**::**********:*********.***:**:****** *****:*::.::*   

AT5G29000.1     -----------SSSEASPKQ-----------------CNGSFAEVEVGLETLTG------
pt012929_POPTR_ PPSQNDPSLLQSKLEQSPANDKLETSDLDCVKTRFDICNAS-ALLEESSQSINRKQKAPE
                           *. * ** :                 **.* * :* . :::.       

AT5G29000.1     -------DQNESAS--ASRKRVRED------------
pt012929_POPTR_ DRNCQVVDKNEEKTSLAPVKRPRTDEATALSAEPASN
                       *:**. :  *. ** * *
BoxShade v3.31 C (beta, 970507) Output
AT5G29000.1     - M N N P V P C Q S - - - V S G G N S G G Y L F P S S S G Y C N - - - V S A V L P H G R N L Q N Q P P V S T V P R D R L
pt012929_POPTR_    M I R N P A S Q Q A S P L S S G N G S V G H L V S S S S R F T N D M S V S A V S P Q G K Q S H N S P F I S Q S L R D G -
 
AT5G29000.1     A M Q D C P L I A Q S - - - - - - - S L I N H H - - - - - - - - P Q E F I D P L H E F F D F S D H V P V Q N L Q A E S S
pt012929_POPTR_    - - G N F P P T H Y S H S E G Q S T A F I N H S D D N K G L S W P - - - I D P L Q E F I N F V E N V P V Q N G Q V E S T
 
AT5G29000.1     G V R V D S S V E L H K K S E W Q D W A D Q L I S V D D G S E P N W S E L L G D S S S H N - - - - - - - P N S E I P T P
pt012929_POPTR_    A - G V I A S E D H A K R T D W Q E W A D Q L I S V D D E L E P N W S E I L N D V N M K D S K Q K M L S P N N S V Q Q P
 
AT5G29000.1     F L D V P R L D I T A N Q Q Q Q M V S S E D Q L S G R N S S S S V A T S K Q R M R W T P E L H E A F V E A V N Q L G G S
pt012929_POPTR_    L I - - - - - - - - - - H Q H Q T A H S G E V C A V T N P L L A A P P T K S R M R W T P E L H E A F V E A V N Q L G G S
 
AT5G29000.1     E R A T P K A V L K L L N N P G L T I Y H V K S H L Q K Y R T A R Y K P E T S E V T G E P Q E K K M T S I E D I K S L D
pt012929_POPTR_    E R A T P K G V L K Q M N V E G L T I Y H V K S H L Q K Y R T A R Y K P E S S E G T - - - S E K K L S P V E E M K S L D
 
AT5G29000.1     M K T S V E I T Q A L R L Q M E V Q K R L H E Q L E I Q R S L Q L Q I E K Q G R Y L Q M M F E K Q Q K I Q D N K S - - -
pt012929_POPTR_    L K T S M E I S E A L R L Q M E V Q K Q L H E Q L E I Q R N L Q L R I E E Q G R Y L Q E M F E K Q K K M E G D R S K A P
 
AT5G29000.1     - - - - - - - - - - - S S S E A S P K Q - - - - - - - - - - - - - - - - - C N G S F A E V E V G L E T L T G - - - - - -
pt012929_POPTR_    P P S Q N D P S L L Q S K L E Q S P A N D K L E T S D L D C V K T R F D I C N A S - A L L E E S S Q S I N R K Q K A P E
 
AT5G29000.1     - - - - - - - D Q N E S A S - - A S R K R V R E D - - - - - - - - - - - -
pt012929_POPTR_    D R N C Q V V D K N E E K T S L A P V K R P R T D E A T A L S A E P A S N
 
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