fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G29000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015712 not found in 431aa AT5G29000.2 1st_not 0.413513513 II
Pt012929 not found in 436aa AT3G04450.1 not_not 0.409459459 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G29000.1     -MNNPVPCQ--SVSGGN-SGGYLFPSSSGYCN---VSAVLPHGRNLQNQPPVSTVPRDR-
pt012929_POPTR_ MIRNPASQQASPLSSGNGSVGHLVSSSSRFTNDMSVSAVSPQGKQSHNSPFISQSLRDGG
pt015712_POPTR_ MMRNSASQQASSLSPGNRSVGPLFSSSSRFSNDMHVSSVSPQGRQSHNSPFISQSLRDRG
                 :.*... *  .:* ** * * *..*** : *   **:* *:*:: :*.* :*   **  

AT5G29000.1     --LAMQDCPLIAQSSLINHHPQEF------IDPLHEFFDFSDHVPVQNLQAESSGVRVDS
pt012929_POPTR_ NFPPTHYSHSEGQSTAFINHSDDNKGLSWPIDPLQEFINFVENVPVQNGQVESTA-GVIA
pt015712_POPTR_ NFTPTHDSHSEVQSTEFIAYSDENKDLSWPVDPLQDLLDFAGNVHVQNGQVESSA-GVFA
                   . : .    **: :  :.::       :***:::::*  :* *** *.**:.  * :

AT5G29000.1     SVELHKKSEWQDWADQLISVDDGSEPNWSELLGDSSSH---------NPNSEIPTPFLDV
pt012929_POPTR_ SEDHAKRTDWQEWADQLISVDDELEPNWSEILNDVNMKDSKQKML--SPNNSVQQPLI--
pt015712_POPTR_ SEDHAKRTDWQEWADQLISVDDELEPNWSEILNDVNKTDSRQKELKPSPNISVKQPPI--
                * :  *:::**:**********  ******:*.* .           .** .:  * :  

AT5G29000.1     PRLDITANQQQQMVSSEDQLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERAT
pt012929_POPTR_ --------HQHQTAHSGEVCAVTNPLLAAPPTKSRMRWTPELHEAFVEAVNQLGGSERAT
pt015712_POPTR_ --------HQHQTAHSGEVCAVANPLSAAPTTKPRMRWTPELHEAFVEAVNQLGGSERAT
                        :*:* . * :  :  *.  :...:* **************************

AT5G29000.1     PKAVLKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTS
pt012929_POPTR_ PKGVLKQMNVEGLTIYHVKSHLQKYRTARYKPESSEGT---SEKKLSPVEEMKSLDLKTS
pt015712_POPTR_ PKGVLKHMNVEGLTIYHVKSHLQKYRSARYKPESSD------EKKTSPIEEMKSLDLKTS
                **.*** :*  ***************:******:*:      *** :.:*::****:***

AT5G29000.1     VEITQALRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDNKS-----SS
pt012929_POPTR_ MEISEALRLQMEVQKQLHEQLEIQRNLQLRIEEQGRYLQEMFEKQKKMEGDRSKAPPPSQ
pt015712_POPTR_ MGITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRHLQEMFEKQRKIEDDKSKAPSSSQ
                : *::**********:*********.***:**:***:** *****:*::.::*     *.

AT5G29000.1     SEASPKQ--------------------------CNGSFAEVEVGLETLTGDQN-------
pt012929_POPTR_ NDPSLLQSKLEQSPANDKLETSDLDCVKTRFDICNAS-ALLEESSQSINRKQKAPEDRNC
pt015712_POPTR_ DDPSPLQAKLEQSSANYKLEASELDLVKTS----NES-ALLEESSQSISRKQKAPEERND
                .:.*  *                           * * * :* . :::. .*:       

AT5G29000.1     --------ESASASRKRVRED------------
pt012929_POPTR_ QVVDKNEEKTSLAPVKRPRTDEATALSAEPASN
pt015712_POPTR_ QVLDQIDEESSPAPIKRPRRDETAELSTGAASN
                        ::: *. ** * *
BoxShade v3.31 C (beta, 970507) Output
AT5G29000.1     - M N N P V P C Q - - S V S G G N - S G G Y L F P S S S G Y C N - - - V S A V L P H G R N L Q N Q P P V S T V P R D R -
pt012929_POPTR_    M I R N P A S Q Q A S P L S S G N G S V G H L V S S S S R F T N D M S V S A V S P Q G K Q S H N S P F I S Q S L R D G G
pt015712_POPTR_    M M R N S A S Q Q A S S L S P G N R S V G P L F S S S S R F S N D M H V S S V S P Q G R Q S H N S P F I S Q S L R D R G
 
AT5G29000.1     - - L A M Q D C P L I A Q S S L I N H H P Q E F - - - - - - I D P L H E F F D F S D H V P V Q N L Q A E S S G V R V D S
pt012929_POPTR_    N F P P T H Y S H S E G Q S T A F I N H S D D N K G L S W P I D P L Q E F I N F V E N V P V Q N G Q V E S T A - G V I A
pt015712_POPTR_    N F T P T H D S H S E V Q S T E F I A Y S D E N K D L S W P V D P L Q D L L D F A G N V H V Q N G Q V E S S A - G V F A
 
AT5G29000.1     S V E L H K K S E W Q D W A D Q L I S V D D G S E P N W S E L L G D S S S H - - - - - - - - - N P N S E I P T P F L D V
pt012929_POPTR_    S E D H A K R T D W Q E W A D Q L I S V D D E L E P N W S E I L N D V N M K D S K Q K M L - - S P N N S V Q Q P L I - -
pt015712_POPTR_    S E D H A K R T D W Q E W A D Q L I S V D D E L E P N W S E I L N D V N K T D S R Q K E L K P S P N I S V K Q P P I - -
 
AT5G29000.1     P R L D I T A N Q Q Q Q M V S S E D Q L S G R N S S S S V A T S K Q R M R W T P E L H E A F V E A V N Q L G G S E R A T
pt012929_POPTR_    - - - - - - - - H Q H Q T A H S G E V C A V T N P L L A A P P T K S R M R W T P E L H E A F V E A V N Q L G G S E R A T
pt015712_POPTR_    - - - - - - - - H Q H Q T A H S G E V C A V A N P L S A A P T T K P R M R W T P E L H E A F V E A V N Q L G G S E R A T
 
AT5G29000.1     P K A V L K L L N N P G L T I Y H V K S H L Q K Y R T A R Y K P E T S E V T G E P Q E K K M T S I E D I K S L D M K T S
pt012929_POPTR_    P K G V L K Q M N V E G L T I Y H V K S H L Q K Y R T A R Y K P E S S E G T - - - S E K K L S P V E E M K S L D L K T S
pt015712_POPTR_    P K G V L K H M N V E G L T I Y H V K S H L Q K Y R S A R Y K P E S S D - - - - - - E K K T S P I E E M K S L D L K T S
 
AT5G29000.1     V E I T Q A L R L Q M E V Q K R L H E Q L E I Q R S L Q L Q I E K Q G R Y L Q M M F E K Q Q K I Q D N K S - - - - - S S
pt012929_POPTR_    M E I S E A L R L Q M E V Q K Q L H E Q L E I Q R N L Q L R I E E Q G R Y L Q E M F E K Q K K M E G D R S K A P P P S Q
pt015712_POPTR_    M G I T E A L R L Q M E V Q K R L H E Q L E I Q R N L Q L R I E E Q G R H L Q E M F E K Q R K I E D D K S K A P S S S Q
 
AT5G29000.1     S E A S P K Q - - - - - - - - - - - - - - - - - - - - - - - - - - C N G S F A E V E V G L E T L T G D Q N - - - - - - -
pt012929_POPTR_    N D P S L L Q S K L E Q S P A N D K L E T S D L D C V K T R F D I C N A S - A L L E E S S Q S I N R K Q K A P E D R N C
pt015712_POPTR_    D D P S P L Q A K L E Q S S A N Y K L E A S E L D L V K T S - - - - N E S - A L L E E S S Q S I S R K Q K A P E E R N D
 
AT5G29000.1     - - - - - - - - E S A S A S R K R V R E D - - - - - - - - - - - -
pt012929_POPTR_    Q V V D K N E E K T S L A P V K R P R T D E A T A L S A E P A S N
pt015712_POPTR_    Q V L D Q I D E E S S P A P I K R P R R D E T A E L S T G A A S N
 
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