fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G35550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046082 not found in 242aa AT5G35550.1 1st_1st 0.377079482 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G35550.1     MGKRATTSVRREELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWK
gm046082_Glyma1 MGRSPCCS--KEGLNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRLRWL
                **: .  *  :* ******* *******:** .****:* .**::************** 

AT5G35550.1     NYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRL--
gm046082_Glyma1 NYLRPDIKRGNISPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKD
                *****.*******.**********:***********************:**:** *::  

AT5G35550.1     ----------------PKTQTKQPKRIKHSTNNENNVCVIRTKAIRCSKTLLFS---DLS
gm046082_Glyma1 GHQTTTGNNTQNPMPNPSPSLSPPKLDSH---------VVRTKATKCSKLLFLNPPPHPS
                                *... . **  .*         *:**** :*** *::.   . *

AT5G35550.1     LQKKSSTSPLPLKEQEMDQGGSSLMGDLEFDFDRIHSEFHFPDLMDFDGLDCGNVTSLVS
gm046082_Glyma1 MQNKFKTE----AEEEEEEARLQLS-------------------------PCSDQPDPMF
                :*:* .*.     *:* ::.  .*                           *.: .. : 

AT5G35550.1     SNEIL--------GELVPAQGNL--DLNRPFTSCHHRGDDEDWLRDF--TC-
gm046082_Glyma1 SDEVLKDWTHNNFADEANASNNLRSELRRRYRI----------LRKLKITCS
                *:*:*        .: . *..**  :*.* :            **.:  **
BoxShade v3.31 C (beta, 970507) Output
AT5G35550.1     M G K R A T T S V R R E E L N R G A W T D H E D K I L R D Y I T T H G E G K W S T L P N Q A G L K R C G K S C R L R W K
gm046082_Glyma1    M G R S P C C S - - K E G L N R G A W T A H E D K I L R E Y I R V H G E G R W R N L P K R A G L K R C G K S C R L R W L
 
AT5G35550.1     N Y L R P G I K R G N I S S D E E E L I I R L H N L L G N R W S L I A G R L P G R T D N E I K N H W N S N L R K R L - -
gm046082_Glyma1    N Y L R P D I K R G N I S P D E E E L I I R L H K L L G N R W S L I A G R L P G R T D N E I K N Y W N T N L G K K V K D
 
AT5G35550.1     - - - - - - - - - - - - - - - - P K T Q T K Q P K R I K H S T N N E N N V C V I R T K A I R C S K T L L F S - - - D L S
gm046082_Glyma1    G H Q T T T G N N T Q N P M P N P S P S L S P P K L D S H - - - - - - - - - V V R T K A T K C S K L L F L N P P P H P S
 
AT5G35550.1     L Q K K S S T S P L P L K E Q E M D Q G G S S L M G D L E F D F D R I H S E F H F P D L M D F D G L D C G N V T S L V S
gm046082_Glyma1    M Q N K F K T E - - - - A E E E E E E A R L Q L S - - - - - - - - - - - - - - - - - - - - - - - - - P C S D Q P D P M F
 
AT5G35550.1     S N E I L - - - - - - - - G E L V P A Q G N L - - D L N R P F T S C H H R G D D E D W L R D F - - T C -
gm046082_Glyma1    S D E V L K D W T H N N F A D E A N A S N N L R S E L R R R Y R I - - - - - - - - - - L R K L K I T C S
 
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