fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G38800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm022507 not found in 193aa AT3G30530.1 1st_not 0.434523809 II
Pt003451 not found in 193aa AT3G30530.1 1st_not 0.440476190 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G38800.1     MQPSTNIFSLHGCPPSYLSHIPTSS-PFCG-----QNPNPFFSFETGVN--------TSQ
pt003451_POPTR_ MQPS-EVTGLH-----YL--VPSSPSPYSANFSMSQNDSQMFQ---FTNPSYNSQI-PSQ
gm022507_Glyma0 MQAR-EITGLN-----YL--LPPDP---CFNYSMVQNTIPTFQLHKLSNQFYGLQKPPPQ
                **.  :: .*:     **  :*...   .      **    *.     *        ..*

AT5G38800.1     FMSLIS-------SNNSTSDEAEENHKEIINERKQKRKISNRESARRSRMRKQRQVDELW
pt003451_POPTR_ V-QEFS-LQASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKHLDELW
gm022507_Glyma0 VLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELW
                .   :*       *. ******:*:: .:*****::* :**************:::****

AT5G38800.1     SQVMWLRDENHQLLRKLNCVLESQEKVIEENVQLKEETTELKQMISDMQLQNQSPF--SC
pt003451_POPTR_ SQVVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQL--NSPY--PL
gm022507_Glyma0 SQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQL--HSPYHPPP
                ***:*:*:*****: *** * *.:::* .**.**:**:: *:*:: ****  :**:  . 

AT5G38800.1     IRDDDDVV-----------------------
pt003451_POPTR_ LKDLEDITCDTAYLGSESSNQSITSSSDLLG
gm022507_Glyma0 LSPIDDDV--SPYVKSDS---SITDSLDLLG
                :   :* .
BoxShade v3.31 C (beta, 970507) Output
AT5G38800.1     M Q P S T N I F S L H G C P P S Y L S H I P T S S - P F C G - - - - - Q N P N P F F S F E T G V N - - - - - - - - T S Q
pt003451_POPTR_    M Q P S - E V T G L H - - - - - Y L - - V P S S P S P Y S A N F S M S Q N D S Q M F Q - - - F T N P S Y N S Q I - P S Q
gm022507_Glyma0    M Q A R - E I T G L N - - - - - Y L - - L P P D P - - - C F N Y S M V Q N T I P T F Q L H K L S N Q F Y G L Q K P P P Q
 
AT5G38800.1     F M S L I S - - - - - - - S N N S T S D E A E E N H K E I I N E R K Q K R K I S N R E S A R R S R M R K Q R Q V D E L W
pt003451_POPTR_    V - Q E F S - L Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L W
gm022507_Glyma0    V L A D F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E L W
 
AT5G38800.1     S Q V M W L R D E N H Q L L R K L N C V L E S Q E K V I E E N V Q L K E E T T E L K Q M I S D M Q L Q N Q S P F - - S C
pt003451_POPTR_    S Q V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q L - - N S P Y - - P L
gm022507_Glyma0    S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q L - - H S P Y H P P P
 
AT5G38800.1     I R D D D D V V - - - - - - - - - - - - - - - - - - - - - - -
pt003451_POPTR_    L K D L E D I T C D T A Y L G S E S S N Q S I T S S S D L L G
gm022507_Glyma0    L S P I D D D V - - S P Y V K S D S - - - S I T D S L D L L G
 
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