fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G38800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050542 not found in 195aa AT3G30530.1 not_not 0.434523809 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.422619047 III
Gm035172 not found in 214aa AT3G30530.1 not_not 0.413690476 III
Pt019238 not found in 196aa AT3G30530.1 not_not 0.416666666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G38800.1     MQPSTNIFSLHGCPPSYLSHIPTSSPFCG---------QNPN-PFFSFETGVNTS-----
gm035172_Glyma1 MQTKEVVSSLSYLLPS------NPCSYPP-SNNYTSMIQNSI-PTFQFQRFSNQIYGCNN
gm050542_Glyma1 MQARE-ITGLNYLLPS------DPCPYPG----HYSMVQNTI-PTFQLHKLSNQFYGLQN
pt019238_POPTR_ MQPNE-IAGLHYLVPP------NSSPYSA----HFSMTQDNS-QMFQFNQFTNQSYNFQI
gm051143_Glyma1 MQSREVVSGLNYLLPS------NPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNN
                **.   : .*    *.       ...:           *:     *.:.   *       

AT5G38800.1     -------QFMSLIS-------SNNSTSDEAEENHKEIINERKQKRKISNRESARRSRMRK
gm035172_Glyma1 SHNTTY-QVPD-FS-PQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRK
gm050542_Glyma1 PPK----VLAD-FSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRK
pt019238_POPTR_ PP-----QLQE-FS-LQASCMSSHSTSDEADEQQLSLINERKQRRMISNRESARRSRMRK
gm051143_Glyma1 INNTPYHKVPDLFS-PQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRK
                        . . :*       *.:******:::: .:*****::* :*************

AT5G38800.1     QRQVDELWSQVMWLRDENHQLLRKLNCVLESQEKVIEENVQLKEETTELKQMISDMQLQN
gm035172_Glyma1 QKHLDELWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHS
gm050542_Glyma1 QKHLDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHS
pt019238_POPTR_ QKHLDELWSQVVWLRNENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQLSS
gm051143_Glyma1 QKHLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQIHS
                *:::*******:***:*****: *:* *   :::*::** **:*:  **:*:: ***: .

AT5G38800.1     QS---------------------PFSCIRDDD-------------DVV-
gm035172_Glyma1 PCGGPNSFITPLED--HDVDHV-PSAYLRSDDSSNQFNSCNNNM-DLLG
gm050542_Glyma1 PYHPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG
pt019238_POPTR_ PY--PS--LKGLEDITCD------TAYLRAESSNQ---SITSSS-DLLG
gm051143_Glyma1 PC--PSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG
                                         . :: :.             *::
BoxShade v3.31 C (beta, 970507) Output
AT5G38800.1     M Q P S T N I F S L H G C P P S Y L S H I P T S S P F C G - - - - - - - - - Q N P N - P F F S F E T G V N T S - - - - -
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S - - - - - - N P C S Y P P - S N N Y T S M I Q N S I - P T F Q F Q R F S N Q I Y G C N N
gm050542_Glyma1    M Q A R E - I T G L N Y L L P S - - - - - - D P C P Y P G - - - - H Y S M V Q N T I - P T F Q L H K L S N Q F Y G L Q N
pt019238_POPTR_    M Q P N E - I A G L H Y L V P P - - - - - - N S S P Y S A - - - - H F S M T Q D N S - Q M F Q F N Q F T N Q S Y N F Q I
gm051143_Glyma1    M Q S R E V V S G L N Y L L P S - - - - - - N P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N
 
AT5G38800.1     - - - - - - - Q F M S L I S - - - - - - - S N N S T S D E A E E N H K E I I N E R K Q K R K I S N R E S A R R S R M R K
gm035172_Glyma1    S H N T T Y - Q V P D - F S - P Q S S C I S S N S T S D E A D D Q N L S L I N E R K H R R M L S N R E S A R R S R M R K
gm050542_Glyma1    P P K - - - - V L A D - F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K
pt019238_POPTR_    P P - - - - - Q L Q E - F S - L Q A S C M S S H S T S D E A D E Q Q L S L I N E R K Q R R M I S N R E S A R R S R M R K
gm051143_Glyma1    I N N T P Y H K V P D L F S - P Q S S C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R R S R M R K
 
AT5G38800.1     Q R Q V D E L W S Q V M W L R D E N H Q L L R K L N C V L E S Q E K V I E E N V Q L K E E T T E L K Q M I S D M Q L Q N
gm035172_Glyma1    Q K H L D E L W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q I H S
gm050542_Glyma1    Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q L H S
pt019238_POPTR_    Q K H L D E L W S Q V V W L R N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q L S S
gm051143_Glyma1    Q K H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q I H S
 
AT5G38800.1     Q S - - - - - - - - - - - - - - - - - - - - - P F S C I R D D D - - - - - - - - - - - - - D V V -
gm035172_Glyma1    P C G G P N S F I T P L E D - - H D V D H V - P S A Y L R S D D S S N Q F N S C N N N M - D L L G
gm050542_Glyma1    P Y H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G
pt019238_POPTR_    P Y - - P S - - L K G L E D I T C D - - - - - - T A Y L R A E S S N Q - - - S I T S S S - D L L G
gm051143_Glyma1    P C - - P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G
 
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