fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G38800.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm022507 not found in 193aa AT3G30530.1 1st_not 0.434523809 II
Gm050542 not found in 195aa AT3G30530.1 not_not 0.434523809 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.422619047 III
Gm035172 not found in 214aa AT3G30530.1 not_not 0.413690476 III
Pt003451 not found in 193aa AT3G30530.1 1st_not 0.440476190 II
Pt019238 not found in 196aa AT3G30530.1 not_not 0.416666666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G38800.1     MQPSTNIFSLHGCPPSYLSHIPT-SSPF--CGQNPN-PFFSFETGVNTS-----------
gm051143_Glyma1 MQSREVVSGLNYLLPSNPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINNTPY
gm022507_Glyma0 MQARE-ITGLNYLLPPDPC---F---NY-SMVQNTI-PTFQLHKLSNQFYGLQK---PPP
pt003451_POPTR_ MQPSE-VTGLHYLVPSSPSPYSA---NF-SMSQNDS-QMF---QFTNPSYNSQI----PS
pt019238_POPTR_ MQPNE-IAGLHYLVPPNSSPYSA---HF-SMTQDNS-QMFQFNQFTNQSYNFQI----PP
gm050542_Glyma1 MQARE-ITGLNYLLPSDPCPYPG---HY-SMVQNTI-PTFQLHKLSNQFYGLQN----PP
gm035172_Glyma1 MQTKEVVSSLSYLLPSNPCSYPP-SNNYTSMIQNSI-PTFQFQRFSNQIYGCNNSHNTTY
                **.   : .*    *.  .        :    *:     *      *             

AT5G38800.1     -QFMSLIS-------SNNSTSDEAEENHKEIINERKQKRKISNRESARRSRMRKQRQVDE
gm051143_Glyma1 HKVPDLFS-PQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDE
gm022507_Glyma0 QVLAD-FSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDE
pt003451_POPTR_ -QVQE-FS-LQASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKHLDE
pt019238_POPTR_ -QLQE-FS-LQASCMSSHSTSDEADEQQLSLINERKQRRMISNRESARRSRMRKQKHLDE
gm050542_Glyma1 KVLAD-FSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDE
gm035172_Glyma1 -QVPD-FS-PQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQKHLDE
                  . . :*       *. ******:::: .:*****::* :**************:::**

AT5G38800.1     LWSQVMWLRDENHQLLRKLNCVLESQEKVIEENVQLKEETTELKQMISDMQLQNQS--P-
gm051143_Glyma1 LWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQIHSPC--PS
gm022507_Glyma0 LWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQLHSPYHPPP
pt003451_POPTR_ LWSQVVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQLNSPY--PL
pt019238_POPTR_ LWSQVVWLRNENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQLSSPY--PS
gm050542_Glyma1 LWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHSPYHPPP
gm035172_Glyma1 LWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHSPCGGPN
                *****:*:*:*****: *:* *   :::* .** **:*:   *:*:: ***: .    * 

AT5G38800.1     --FSCIRD--DD---------------------------DVV-
gm051143_Glyma1 SFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG
gm022507_Glyma0 --LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG
pt003451_POPTR_ --LKDLEDITCD------TAYLGSESSNQ---SITSSS-DLLG
pt019238_POPTR_ --LKGLEDITCD------TAYLRAESSNQ---SITSSS-DLLG
gm050542_Glyma1 --LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG
gm035172_Glyma1 SFITPLED--HDVDHV-PSAYLRSDDSSNQFNSCNNNM-DLLG
                  :. : *   *                           *::
BoxShade v3.31 C (beta, 970507) Output
AT5G38800.1     M Q P S T N I F S L H G C P P S Y L S H I P T - S S P F - - C G Q N P N - P F F S F E T G V N T S - - - - - - - - - - -
gm051143_Glyma1    M Q S R E V V S G L N Y L L P S N P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N I N N T P Y
gm022507_Glyma0    M Q A R E - I T G L N Y L L P P D P C - - - F - - - N Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q K - - - P P P
pt003451_POPTR_    M Q P S E - V T G L H Y L V P S S P S P Y S A - - - N F - S M S Q N D S - Q M F - - - Q F T N P S Y N S Q I - - - - P S
pt019238_POPTR_    M Q P N E - I A G L H Y L V P P N S S P Y S A - - - H F - S M T Q D N S - Q M F Q F N Q F T N Q S Y N F Q I - - - - P P
gm050542_Glyma1    M Q A R E - I T G L N Y L L P S D P C P Y P G - - - H Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q N - - - - P P
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S N P C S Y P P - S N N Y T S M I Q N S I - P T F Q F Q R F S N Q I Y G C N N S H N T T Y
 
AT5G38800.1     - Q F M S L I S - - - - - - - S N N S T S D E A E E N H K E I I N E R K Q K R K I S N R E S A R R S R M R K Q R Q V D E
gm051143_Glyma1    H K V P D L F S - P Q S S C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E
gm022507_Glyma0    Q V L A D - F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E
pt003451_POPTR_    - Q V Q E - F S - L Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E
pt019238_POPTR_    - Q L Q E - F S - L Q A S C M S S H S T S D E A D E Q Q L S L I N E R K Q R R M I S N R E S A R R S R M R K Q K H L D E
gm050542_Glyma1    K V L A D - F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E
gm035172_Glyma1    - Q V P D - F S - P Q S S C I S S N S T S D E A D D Q N L S L I N E R K H R R M L S N R E S A R R S R M R K Q K H L D E
 
AT5G38800.1     L W S Q V M W L R D E N H Q L L R K L N C V L E S Q E K V I E E N V Q L K E E T T E L K Q M I S D M Q L Q N Q S - - P -
gm051143_Glyma1    L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q I H S P C - - P S
gm022507_Glyma0    L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y H P P P
pt003451_POPTR_    L W S Q V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q L N S P Y - - P L
pt019238_POPTR_    L W S Q V V W L R N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q L S S P Y - - P S
gm050542_Glyma1    L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y H P P P
gm035172_Glyma1    L W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q I H S P C G G P N
 
AT5G38800.1     - - F S C I R D - - D D - - - - - - - - - - - - - - - - - - - - - - - - - - - D V V -
gm051143_Glyma1    S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G
gm022507_Glyma0    - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G
pt003451_POPTR_    - - L K D L E D I T C D - - - - - - T A Y L G S E S S N Q - - - S I T S S S - D L L G
pt019238_POPTR_    - - L K G L E D I T C D - - - - - - T A Y L R A E S S N Q - - - S I T S S S - D L L G
gm050542_Glyma1    - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G
gm035172_Glyma1    S F I T P L E D - - H D V D H V - P S A Y L R S D D S S N Q F N S C N N N M - D L L G
 
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