fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023097 not found in 359aa AT5G61430.1 1st_not 0.525704809 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39610.1     MDYEASRIVEMV-----EDEEHIDLPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEV
pt023097_POPTR_ --------MENISGLGKEDDDKMDLPPGFRFHPTDEELISHYLYKKVLDINFSARAIGDV
                        :* :     **::::****************:***  **::  *** ***:*

AT5G39610.1     DLNKIEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKS
pt023097_POPTR_ DLNKSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS
                **** ***:**********************************************::***

AT5G39610.1     LVGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGT
pt023097_POPTR_ LVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSSAGK
                ****************** **************:. .***:************** : *.

AT5G39610.1     KVPMS---MLDPHINRMEPAGLPSLMDCSQRDSF---TGSSSHVTCFSDQETEDKRLVHE
pt023097_POPTR_ KTYISGLVRLGSFGNEFSPYGLPPLTDSSPSNGKIRPVAESAYVPCFSNL-SDDQRNQQD
                *. :*    *... *.:.* ***.* *.*  :.    ...*::*.***:  ::*:*  ::

AT5G39610.1     SKDGF---------------------------------GSLFYSDPLFLQDNYSLMKLLL
pt023097_POPTR_ TTDSFNNHLFAVSSNPSEVFPRIPLLNSFYSPQAVAASGNLQYPGSVSIQDR-SVLKALI
                :.*.*                                 *.* *...: :**. *::* *:

AT5G39610.1     DGQETQF----------------------------------SGK-PFDGRDSS-----GT
pt023097_POPTR_ ENQGSNMKQQSSKLERDMASVSQDSAADMNNEISSVISNLEAGKRSFDEQEAPPCTLVQS
                :.* :::                                  :** .** :::.      :

AT5G39610.1     EELDCVWNF
pt023097_POPTR_ MDLDCFWNY
                 :***.**:
BoxShade v3.31 C (beta, 970507) Output
AT5G39610.1     M D Y E A S R I V E M V - - - - - E D E E H I D L P P G F R F H P T D E E L I T H Y L K P K V F N T F F S A T A I G E V
pt023097_POPTR_    - - - - - - - - M E N I S G L G K E D D D K M D L P P G F R F H P T D E E L I S H Y L Y K K V L D I N F S A R A I G D V
 
AT5G39610.1     D L N K I E P W D L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I F K G K S
pt023097_POPTR_    D L N K S E P W E L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I Y R G K S
 
AT5G39610.1     L V G M K K T L V F Y K G R A P K G V K T N W V M H E Y R L E G K Y C I E N L P Q T A K N E W V I C R V F Q K R A D G T
pt023097_POPTR_    L V G M K K T L V F Y K G R A P K G E K T N W V M H E Y R L E G K F S A H N L P K T A K N E W V I C R V F Q K S S A G K
 
AT5G39610.1     K V P M S - - - M L D P H I N R M E P A G L P S L M D C S Q R D S F - - - T G S S S H V T C F S D Q E T E D K R L V H E
pt023097_POPTR_    K T Y I S G L V R L G S F G N E F S P Y G L P P L T D S S P S N G K I R P V A E S A Y V P C F S N L - S D D Q R N Q Q D
 
AT5G39610.1     S K D G F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G S L F Y S D P L F L Q D N Y S L M K L L L
pt023097_POPTR_    T T D S F N N H L F A V S S N P S E V F P R I P L L N S F Y S P Q A V A A S G N L Q Y P G S V S I Q D R - S V L K A L I
 
AT5G39610.1     D G Q E T Q F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S G K - P F D G R D S S - - - - - G T
pt023097_POPTR_    E N Q G S N M K Q Q S S K L E R D M A S V S Q D S A A D M N N E I S S V I S N L E A G K R S F D E Q E A P P C T L V Q S
 
AT5G39610.1     E E L D C V W N F
pt023097_POPTR_    M D L D C F W N Y
 
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