fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029411 not found in 381aa AT5G61430.1 1st_not 0.424543946 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39610.1     MDYEASRIV---EMVEDEE-----------HIDLPPGFRFHPTDEELITHYLKPKVFNTF
Sb029411_Sorbi1 ---CAARSVAPAEVVVVEPLGAGGGGDLGVHVGGEPRVLRQAQPLPLAAHLARRRRHGLL
                    *:* *   *:*  *            *:.  * .  :.    * :*  : : .. :

AT5G39610.1     F--------SATAIGEVDLNKIEPW--------DLPWKAKMGEKE---------------
Sb029411_Sorbi1 LLLVGHVREAATAGGSVHDAALQELHQARRAVVQRPVMREAGQQERRGGGEAEVVRGVGF
                :        :*** *.*.   ::          : *   : *::*               

AT5G39610.1     WYFF----------CV-------RDRKYPTG-----------LRTNR-----------AT
Sb029411_Sorbi1 WRRLLLVEELVALQCVGEAGHVCRRRGVDVGAGAGHVHQRREVRDGRHVVVHLGHLHGAP
                *  :          **       * *   .*           :* .*           *.

AT5G39610.1     EAGYW---KATGKDKEIFK-------------------GKSLVGMKKTLV------FYKG
Sb029411_Sorbi1 FACGWCCCCCTAYDKALLEHPAQHPLVLGAGGGLGGDDGAMELAVEAVLVHDPAGLLALG
                 *  *    .*. ** :::                   *   :.:: .**      :  *

AT5G39610.1     RAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTKVP----------
Sb029411_Sorbi1 RPPR-------VEDERLLG--ADEHLAAVAPEDILVL------ARGLPVPGLRGPVRPQP
                *.*:       :.: ** *  . *:*. .* :: ::       * *  **          

AT5G39610.1     -----------MSMLDPHI-NRMEPAGLPSLMDCSQRDSFTGSSSHVTCFSDQETEDKRL
Sb029411_Sorbi1 RRVLAVLEAEEVPLLLPHLRQRWQVPGL-ALVEVSLADGERGEAG-VGDLAGEVVRDELL
                           :.:* **: :* : .** :*:: *  *.  *.:. *  ::.: ..*: *

AT5G39610.1     VHESK-DGFGSLFYSDPLFLQDNYSLMKLLLDGQETQFSGKPFDGRDSSGTEELDCVWNF
Sb029411_Sorbi1 VRRVEAEARGQL-----------HGPVQLLLH----------------------------
                *:. : :. *.*           :. ::***.
BoxShade v3.31 C (beta, 970507) Output
AT5G39610.1     M D Y E A S R I V - - - E M V E D E E - - - - - - - - - - - H I D L P P G F R F H P T D E E L I T H Y L K P K V F N T F
Sb029411_Sorbi1    - - - C A A R S V A P A E V V V V E P L G A G G G G D L G V H V G G E P R V L R Q A Q P L P L A A H L A R R R R H G L L
 
AT5G39610.1     F - - - - - - - - S A T A I G E V D L N K I E P W - - - - - - - - D L P W K A K M G E K E - - - - - - - - - - - - - - -
Sb029411_Sorbi1    L L L V G H V R E A A T A G G S V H D A A L Q E L H Q A R R A V V Q R P V M R E A G Q Q E R R G G G E A E V V R G V G F
 
AT5G39610.1     W Y F F - - - - - - - - - - C V - - - - - - - R D R K Y P T G - - - - - - - - - - - L R T N R - - - - - - - - - - - A T
Sb029411_Sorbi1    W R R L L L V E E L V A L Q C V G E A G H V C R R R G V D V G A G A G H V H Q R R E V R D G R H V V V H L G H L H G A P
 
AT5G39610.1     E A G Y W - - - K A T G K D K E I F K - - - - - - - - - - - - - - - - - - - G K S L V G M K K T L V - - - - - - F Y K G
Sb029411_Sorbi1    F A C G W C C C C C T A Y D K A L L E H P A Q H P L V L G A G G G L G G D D G A M E L A V E A V L V H D P A G L L A L G
 
AT5G39610.1     R A P K G V K T N W V M H E Y R L E G K Y C I E N L P Q T A K N E W V I C R V F Q K R A D G T K V P - - - - - - - - - -
Sb029411_Sorbi1    R P P R - - - - - - - V E D E R L L G - - A D E H L A A V A P E D I L V L - - - - - - A R G L P V P G L R G P V R P Q P
 
AT5G39610.1     - - - - - - - - - - - M S M L D P H I - N R M E P A G L P S L M D C S Q R D S F T G S S S H V T C F S D Q E T E D K R L
Sb029411_Sorbi1    R R V L A V L E A E E V P L L L P H L R Q R W Q V P G L - A L V E V S L A D G E R G E A G - V G D L A G E V V R D E L L
 
AT5G39610.1     V H E S K - D G F G S L F Y S D P L F L Q D N Y S L M K L L L D G Q E T Q F S G K P F D G R D S S G T E E L D C V W N F
Sb029411_Sorbi1    V R R V E A E A R G Q L - - - - - - - - - - - H G P V Q L L L H - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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