fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39610.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046633 not found in 350aa AT5G61430.1 1st_not 0.514096185 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39610.1     MDYEASRIVEMVEDEEHIDLPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKI
gm046633_Glyma1 ----MENVPVVCKEDDQMDLPPGFRFHPTDEELISHYLYKKVIDTKFCARAIGEVDLNKS
                     ..:  : ::::::****************:***  **::* *.* ********* 

AT5G39610.1     EPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMK
gm046633_Glyma1 EPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMK
                ***************************************************:********

AT5G39610.1     KTLVFYKGRAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTKVPMS
gm046633_Glyma1 KTLVFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKKTHIS
                ******:****** *:************:.:.***:************** : *.*. :*

AT5G39610.1     ---MLDPHINRMEPAGLPSLMDCSQRDSFT---GSSSHVTCFSD----QETEDKRLVHES
gm046633_Glyma1 GIMRLDSFADELGSSALPPLSDSSPSIGNTKPLNDTAYVPCFSNPIDVQRNQEGVF----
                    **.. :.: .:.**.* *.*   . *   ..:::*.***:    *..::  :    

AT5G39610.1     KDGFGSLFY---SDPL-------------------------------FLQDNYSLMKLLL
gm046633_Glyma1 -DSFTNSIYAVSSNPMGILPRMPPSGSFYSTQGVQAAPNLAFPGSVYTLQD-HTILRTLC
                 *.* . :*   *:*:                                *** ::::: * 

AT5G39610.1     D-------------GQETQFSG--------------KPFDGRDSSGTE----ELDCVWNF
gm046633_Glyma1 ENNGYKPERDMISVSQETGLTTDINAETSSNFDMGRRPFENHNHASVSVAPLDLDGLWNY
                :             .*** ::               :**:.:: :...    :** :**:
BoxShade v3.31 C (beta, 970507) Output
AT5G39610.1     M D Y E A S R I V E M V E D E E H I D L P P G F R F H P T D E E L I T H Y L K P K V F N T F F S A T A I G E V D L N K I
gm046633_Glyma1    - - - - M E N V P V V C K E D D Q M D L P P G F R F H P T D E E L I S H Y L Y K K V I D T K F C A R A I G E V D L N K S
 
AT5G39610.1     E P W D L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I F K G K S L V G M K
gm046633_Glyma1    E P W D L P W K A K M G E K E W Y F F C V R D R K Y P T G L R T N R A T E A G Y W K A T G K D K E I F R G K S L V G M K
 
AT5G39610.1     K T L V F Y K G R A P K G V K T N W V M H E Y R L E G K Y C I E N L P Q T A K N E W V I C R V F Q K R A D G T K V P M S
gm046633_Glyma1    K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F S V H N L P K T A K N E W V I C R V F Q K S S A G K K T H I S
 
AT5G39610.1     - - - M L D P H I N R M E P A G L P S L M D C S Q R D S F T - - - G S S S H V T C F S D - - - - Q E T E D K R L V H E S
gm046633_Glyma1    G I M R L D S F A D E L G S S A L P P L S D S S P S I G N T K P L N D T A Y V P C F S N P I D V Q R N Q E G V F - - - -
 
AT5G39610.1     K D G F G S L F Y - - - S D P L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F L Q D N Y S L M K L L L
gm046633_Glyma1    - D S F T N S I Y A V S S N P M G I L P R M P P S G S F Y S T Q G V Q A A P N L A F P G S V Y T L Q D - H T I L R T L C
 
AT5G39610.1     D - - - - - - - - - - - - - G Q E T Q F S G - - - - - - - - - - - - - - K P F D G R D S S G T E - - - - E L D C V W N F
gm046633_Glyma1    E N N G Y K P E R D M I S V S Q E T G L T T D I N A E T S S N F D M G R R P F E N H N H A S V S V A P L D L D G L W N Y
 
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