fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004062 not found in 506aa AT5G39660.2 1st_not 0.404336734 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39660.1     MADP---AIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGD--
pt004062_POPTR_ MSEPKDQAFKLFGKTIQVPEISVTTATT-------------------TDDDDDDDSQDQD
                *::*   *:******* :**:.*. :::                   *.****::  *  

AT5G39660.1     ------SGLGRE------EGDDVGDGGGE-SETDKKEEKDS------ECQEE-----SLR
pt004062_POPTR_ RPSCANSSLDETNITDDYNNNDKRDHGEEDTETD---DKDSVGKTTIENQEDGASPVAAK
                      *.*..       :.:*  * * * :***   :***      * **:     : :

AT5G39660.1     NESN-DVTTTTS------GITEKTETTKAAKTNEESGGTACSQEGKLKKPDKILPCPRCN
pt004062_POPTR_ ESSNLDATSGTSENPKTPSVEKESTALKTSNTEEEQSDTSNSQEKTLKKPDKIIPCPRCN
                :.** *.*: **      .: ::: : *:::*:**...*: *** .*******:******

AT5G39660.1     SMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSPASHYNRHVSIT
pt004062_POPTR_ SMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHY-RHITI-
                **:*******************:************************..**** **::* 

AT5G39660.1     SAEAMQKVARTDLQHPNGAN---------LLTFGSDSVLCESMASGLNLVEKSLLK-TQT
pt004062_POPTR_ -PEALQN-GRADV--PNGVHHPSLKTNGTVLTFGSDAPLHESMASVLNLADKTMRNCTMN
                 .**:*: .*:*:  ***.:         :******: * ***** ***.:*:: : * .

AT5G39660.1     VLQEPNEGLKI-----------------TVPLNQTNEEAG-TVS-----------PLPKV
pt004062_POPTR_ GFHKP-EALRVPVSYGGGENGDDHSNGSSVTVSNSSDEAGKSVSKESAMQNYQGYP-PQI
                 :::* *.*::                 :*.:.::.:*** :**           * *::

AT5G39660.1     PCFPGPPPTWPYAWNGVSWTI-------------LPFYPPPAYWSCPGVSPGAWNSFTWM
pt004062_POPTR_ PCFPGVP--WPYPWNSAQWSSPVPPPAFCPSSFPMPFYPAAAYWGC--TVPGAWN-VPWL
                ***** *  ***.**...*:              :****..***.*  . ***** ..*:

AT5G39660.1     PQPNSP----SGSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLR
pt004062_POPTR_ PQPSSPKQTSSSSDPNSPTLGKHSRDENLLKPSNSKEEL-------VNTERCLWIPKTLR
                ***.**    *.*:**************  :*..: :*         :.*****:*****

AT5G39660.1     IDDPEEAAKSSIWETLGIKKDENAD-----TFGAFRSSTKEKSSLSEGRLPGRRPELQAN
pt004062_POPTR_ IDDPGEAAKSSIWTTLGIKNDKPGSFGGRGLFKAFDSKV-EKNRAAE-----TSPVLHAN
                **** ******** *****:*: ..      * ** *.. **.  :*       * *:**

AT5G39660.1     PAALSRSANFHESS
pt004062_POPTR_ PAALSRSLKFQESS
                ******* :*:***
BoxShade v3.31 C (beta, 970507) Output
AT5G39660.1     M A D P - - - A I K L F G K T I P L P E L G V V D S S S S Y T G F L T E T Q I P V R L S D S C T G D D D D E E M G D - -
pt004062_POPTR_    M S E P K D Q A F K L F G K T I Q V P E I S V T T A T T - - - - - - - - - - - - - - - - - - - T D D D D D D D S Q D Q D
 
AT5G39660.1     - - - - - - S G L G R E - - - - - - E G D D V G D G G G E - S E T D K K E E K D S - - - - - - E C Q E E - - - - - S L R
pt004062_POPTR_    R P S C A N S S L D E T N I T D D Y N N N D K R D H G E E D T E T D - - - D K D S V G K T T I E N Q E D G A S P V A A K
 
AT5G39660.1     N E S N - D V T T T T S - - - - - - G I T E K T E T T K A A K T N E E S G G T A C S Q E G K L K K P D K I L P C P R C N
pt004062_POPTR_    E S S N L D A T S G T S E N P K T P S V E K E S T A L K T S N T E E E Q S D T S N S Q E K T L K K P D K I I P C P R C N
 
AT5G39660.1     S M E T K F C Y Y N N Y N V N Q P R H F C K K C Q R Y W T A G G T M R N V P V G A G R R K N K S P A S H Y N R H V S I T
pt004062_POPTR_    S M D T K F C Y Y N N Y N V N Q P R H F C K N C Q R Y W T A G G T M R N V P V G A G R R K N K N S A S H Y - R H I T I -
 
AT5G39660.1     S A E A M Q K V A R T D L Q H P N G A N - - - - - - - - - L L T F G S D S V L C E S M A S G L N L V E K S L L K - T Q T
pt004062_POPTR_    - P E A L Q N - G R A D V - - P N G V H H P S L K T N G T V L T F G S D A P L H E S M A S V L N L A D K T M R N C T M N
 
AT5G39660.1     V L Q E P N E G L K I - - - - - - - - - - - - - - - - - T V P L N Q T N E E A G - T V S - - - - - - - - - - - P L P K V
pt004062_POPTR_    G F H K P - E A L R V P V S Y G G G E N G D D H S N G S S V T V S N S S D E A G K S V S K E S A M Q N Y Q G Y P - P Q I
 
AT5G39660.1     P C F P G P P P T W P Y A W N G V S W T I - - - - - - - - - - - - - L P F Y P P P A Y W S C P G V S P G A W N S F T W M
pt004062_POPTR_    P C F P G V P - - W P Y P W N S A Q W S S P V P P P A F C P S S F P M P F Y P A A A Y W G C - - T V P G A W N - V P W L
 
AT5G39660.1     P Q P N S P - - - - S G S N P N S P T L G K H S R D E N A A E P G T A F D E T E S L G R E K S K P E R C L W V P K T L R
pt004062_POPTR_    P Q P S S P K Q T S S S S D P N S P T L G K H S R D E N L L K P S N S K E E L - - - - - - - V N T E R C L W I P K T L R
 
AT5G39660.1     I D D P E E A A K S S I W E T L G I K K D E N A D - - - - - T F G A F R S S T K E K S S L S E G R L P G R R P E L Q A N
pt004062_POPTR_    I D D P G E A A K S S I W T T L G I K N D K P G S F G G R G L F K A F D S K V - E K N R A A E - - - - - T S P V L H A N
 
AT5G39660.1     P A A L S R S A N F H E S S
pt004062_POPTR_    P A A L S R S L K F Q E S S
 
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