fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050382 not found in 308aa AT3G28920.1 1st_not 0.432835820 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39760.1     MMDMTPT---ITTTTTPT-PKSPEPESETPTRI-QPAKP-----ISFSNGIIKRHHHH--
gm050382_Glyma1 -MDITPTTTIINTTTTPSAAKSPEHETETPTRITTPITPTTTKTLSFSNGVLKRHHHHHL
                 **:***   *.*****: .**** *:******  * .*     :*****::******  

AT5G39760.1     HHPL--LFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRR
gm050382_Glyma1 HHPMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSIKCAACGCHRNFHRR
                ***:  :.*********** *** ************:: ::**:*:**************

AT5G39760.1     DPDNNNDSSQIPPPPSTA-----VEYQPHHRHHPPPP-PPPPPPRSPNSASPPPISSSY-
gm050382_Glyma1 EPED---------PPITSNTTHVIEYQPHHRHHPPPPLHAAAAARSPNSASPPPISSSYY
                :*::         ** *:     :*************  .....*************** 

AT5G39760.1     -----MLLSLSGTNNNNNNLASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEK
gm050382_Glyma1 PSAPHMLLALSA------GLAAPPESTAAP----------SAALSRKRFRTKFSQEQKEK
                     ***:**.      .**: .: . :.          :   *********** ****

AT5G39760.1     MHEFAERVGWKMQKRDEDDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRDIAGNEIRQIDN
gm050382_Glyma1 MHKFAEKVGWKIQKRDEDLIHEFCNEVGVDRSVLKVWMHNNKNTFAKKD---NNI-----
                **:***:****:****** :::**.::***:************** ::*   *:*     

AT5G39760.1     GGGNHTPILAGEINNHNNGHHGVGGGGELHQSVSSGGGGGGFDSDS----GGANGGNVNG
gm050382_Glyma1 -------VFENPNNNHGSG---------------SGGGEDPAEDPSRNHYGGVNVG-ANG
                       :: .  ***..*               **** .  :. *    **.* * .**

AT5G39760.1     SSSS-
gm050382_Glyma1 SSSSS
                ****
BoxShade v3.31 C (beta, 970507) Output
AT5G39760.1     M M D M T P T - - - I T T T T T P T - P K S P E P E S E T P T R I - Q P A K P - - - - - I S F S N G I I K R H H H H - -
gm050382_Glyma1    - M D I T P T T T I I N T T T T P S A A K S P E H E T E T P T R I T T P I T P T T T K T L S F S N G V L K R H H H H H L
 
AT5G39760.1     H H P L - - L F T Y K E C L K N H A A A L G G H A L D G C G E F M P S P S S I S S D P T S L K C A A C G C H R N F H R R
gm050382_Glyma1    H H P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R N F H R R
 
AT5G39760.1     D P D N N N D S S Q I P P P P S T A - - - - - V E Y Q P H H R H H P P P P - P P P P P P R S P N S A S P P P I S S S Y -
gm050382_Glyma1    E P E D - - - - - - - - - P P I T S N T T H V I E Y Q P H H R H H P P P P L H A A A A A R S P N S A S P P P I S S S Y Y
 
AT5G39760.1     - - - - - M L L S L S G T N N N N N N L A S F S D L N F S A G N N H H H H H Q H T L H G S R K R F R T K F S Q F Q K E K
gm050382_Glyma1    P S A P H M L L A L S A - - - - - - G L A A P P E S T A A P - - - - - - - - - - S A A L S R K R F R T K F S Q E Q K E K
 
AT5G39760.1     M H E F A E R V G W K M Q K R D E D D V R D F C R Q I G V D K S V L K V W M H N N K N T F N R R D I A G N E I R Q I D N
gm050382_Glyma1    M H K F A E K V G W K I Q K R D E D L I H E F C N E V G V D R S V L K V W M H N N K N T F A K K D - - - N N I - - - - -
 
AT5G39760.1     G G G N H T P I L A G E I N N H N N G H H G V G G G G E L H Q S V S S G G G G G G F D S D S - - - - G G A N G G N V N G
gm050382_Glyma1    - - - - - - - V F E N P N N N H G S G - - - - - - - - - - - - - - - S G G G E D P A E D P S R N H Y G G V N V G - A N G
 
AT5G39760.1     S S S S -
gm050382_Glyma1    S S S S S
 
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