fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019249 not found in 400aa AT1G26870.1 not_not 0.457869634 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39820.1     MVLVMDDEESNNVERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKY
pt019249_POPTR_ ----MD--EKNDVDKIDDVMLPGFRFHPTDEELVGFYLKRKIQQRSLPIELIKQVDIYKY
                    **  *.*:*:: ***:**************.******: ::***::***:******

AT5G39820.1     DPWDLP----TMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCI
pt019249_POPTR_ DPWDLPKELATTGEKELYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTECI
                ******    * **** *************:*******.************** *.*.**

AT5G39820.1     GLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPS
pt019249_POPTR_ GLKKSLVFYRGRAAKGIKTDWMMHEFRLPSLAE---PSPP-----KKLLD-----KSLPA
                ****************:**************::   .* *     *: *:     *.**:

AT5G39820.1     NDAWAICRIFKKTNAVSSQRSIPQSWVYPTIPDNN------QQSH--------NNTATLL
pt019249_POPTR_ NDAWAICRIFKKTNSM-AQRALSHSWVSP-LPDTTASDLFAQGAHFPQFCSENMSCVTEI
                **************:: :**::.:*** * :**..      * :*         . .* :

AT5G39820.1     ASSDVLSHISTRQNF------------IPS--PVNE--------PASFTESAASYFASQ-
pt019249_POPTR_ GSS---FHIGSNSDFQQASPASFSVLDIPSYKPINPAVYKSYLCPVSNGDLSNNFLCSQL
                .**    **.:..:*            ***  *:*         *.*  : : .::.** 

AT5G39820.1     --------------------MLG--------VTYNTARNNGTGDALFLR-----NNGTGD
pt019249_POPTR_ EISGPIKSTDDAHSMLLNPALIGEAGKTSESIEYEGSQQQFNGFSINLLQEMQGNTGTGD
                                    ::*        : *: :::: .* :: *      *.****

AT5G39820.1     --ALVLSNNENNYFNNLTG-----GLTHEVPNVRSMVMEETTG-------SEMSATSYST
pt019249_POPTR_ DEAGFRKNPSSIHENNLVGTIRSIGFPFSLPSNLADAWKSNLAWDSPSCHSEMS-TTYST
                  * . .* .. : ***.*     *:...:*.  : . :.. .       **** *:***

AT5G39820.1     NN---
pt019249_POPTR_ NKCNT
                *:
BoxShade v3.31 C (beta, 970507) Output
AT5G39820.1     M V L V M D D E E S N N V E R Y D D V V L P G F R F H P T D E E L V S F Y L K R K V L H K S L P F D L I K K V D I Y K Y
pt019249_POPTR_    - - - - M D - - E K N D V D K I D D V M L P G F R F H P T D E E L V G F Y L K R K I Q Q R S L P I E L I K Q V D I Y K Y
 
AT5G39820.1     D P W D L P - - - - T M G E K E W Y F Y C P R D R K Y R N S T R P N R V T G G G F W K A T G T D R P I Y S L D S T R C I
pt019249_POPTR_    D P W D L P K E L A T T G E K E L Y F Y C P R D R K Y R N S A R P N R V T G A G F W K A T G T D R P I Y S S D G T E C I
 
AT5G39820.1     G L K K S L V F Y R G R A A K G V K T D W M M H E F R L P S L S D S H H S S Y P N Y N N K K Q H L N N N N N S K E L P S
pt019249_POPTR_    G L K K S L V F Y R G R A A K G I K T D W M M H E F R L P S L A E - - - P S P P - - - - - K K L L D - - - - - K S L P A
 
AT5G39820.1     N D A W A I C R I F K K T N A V S S Q R S I P Q S W V Y P T I P D N N - - - - - - Q Q S H - - - - - - - - N N T A T L L
pt019249_POPTR_    N D A W A I C R I F K K T N S M - A Q R A L S H S W V S P - L P D T T A S D L F A Q G A H F P Q F C S E N M S C V T E I
 
AT5G39820.1     A S S D V L S H I S T R Q N F - - - - - - - - - - - - I P S - - P V N E - - - - - - - - P A S F T E S A A S Y F A S Q -
pt019249_POPTR_    G S S - - - F H I G S N S D F Q Q A S P A S F S V L D I P S Y K P I N P A V Y K S Y L C P V S N G D L S N N F L C S Q L
 
AT5G39820.1     - - - - - - - - - - - - - - - - - - - - M L G - - - - - - - - V T Y N T A R N N G T G D A L F L R - - - - - N N G T G D
pt019249_POPTR_    E I S G P I K S T D D A H S M L L N P A L I G E A G K T S E S I E Y E G S Q Q Q F N G F S I N L L Q E M Q G N T G T G D
 
AT5G39820.1     - - A L V L S N N E N N Y F N N L T G - - - - - G L T H E V P N V R S M V M E E T T G - - - - - - - S E M S A T S Y S T
pt019249_POPTR_    D E A G F R K N P S S I H E N N L V G T I R S I G F P F S L P S N L A D A W K S N L A W D S P S C H S E M S - T T Y S T
 
AT5G39820.1     N N - - -
pt019249_POPTR_    N K C N T
 
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