fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os031586 not found in 385aa AT1G26870.1 not_not 0.424483306 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39820.1     MVLVMDDEESNNVERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKY
Os031586_Os08t0 ----MEERNDVNMDKSDEILLPGFRFHPTDEELVSFYLKRKIQQKPISIELIRQLDIYKF
                    *::.:. *::: *:::*********************: :*.:.::**:::****:

AT5G39820.1     DPWDLPTM---GEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIG
Os031586_Os08t0 DPWDLPKLASTGEKEWYFYCPRDRKYRNSVRPNRVTTAGFWKATGTDRPIYSTEGTKCIG
                ******.:   ******************.****** .************** :.*:***

AT5G39820.1     LKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSN
Os031586_Os08t0 LKKSLVFYKGRAARGIKTDWMMHEFRLPTLTD---PSLP-----KKPIDKN-----IPLN
                ********:****:*:************:*:*   .* *     *: :::*     :* *

AT5G39820.1     DAWAICRIFKKTNAVSSQRSIPQSW-------VYPTIPDNNQQSHNNTATLLASSDVLSH
Os031586_Os08t0 DSWTICRIFKKTSSM-AQRALCQTWGAQLPGTIDPDIFSTLQSVQASQFALESSSCSLQA
                *:*:********.:: :**:: *:*       : * * .. *. : .  :* :**  *. 

AT5G39820.1     IST--------------------RQNFIPS-PVNEPA------SFTESAASYFASQMLGV
Os031586_Os08t0 AATAAHQITSKYALQGNNNNQQQQQQHKPSNPLDGSSCKVINFNCSQSAEVQNSQIILPF
                 :*                    :*:. ** *:: .:      . ::**    :. :* .

AT5G39820.1     TYNTARNNGTGDALFLRNNGTGDALVL-----SNNENNYFNNLTGGLTHEV--PNVR---
Os031586_Os08t0 EAHTSQKTAT-PLLFDTQFGQPDQISRFVVDSSVNANG------GGISNKSQDPSARKPG
                  :*:::..*   **  : *  * :       * * *.      **::::   *..*   

AT5G39820.1     ------------------------------------SMVMEETTGSEMSATSYSTNN
Os031586_Os08t0 SGFSMNSDWDGVARINFPFDLGADSSEDWRSSIPWESFLSPTTVHAEMPN-------
                                                    *::   *. :**.
BoxShade v3.31 C (beta, 970507) Output
AT5G39820.1     M V L V M D D E E S N N V E R Y D D V V L P G F R F H P T D E E L V S F Y L K R K V L H K S L P F D L I K K V D I Y K Y
Os031586_Os08t0    - - - - M E E R N D V N M D K S D E I L L P G F R F H P T D E E L V S F Y L K R K I Q Q K P I S I E L I R Q L D I Y K F
 
AT5G39820.1     D P W D L P T M - - - G E K E W Y F Y C P R D R K Y R N S T R P N R V T G G G F W K A T G T D R P I Y S L D S T R C I G
Os031586_Os08t0    D P W D L P K L A S T G E K E W Y F Y C P R D R K Y R N S V R P N R V T T A G F W K A T G T D R P I Y S T E G T K C I G
 
AT5G39820.1     L K K S L V F Y R G R A A K G V K T D W M M H E F R L P S L S D S H H S S Y P N Y N N K K Q H L N N N N N S K E L P S N
Os031586_Os08t0    L K K S L V F Y K G R A A R G I K T D W M M H E F R L P T L T D - - - P S L P - - - - - K K P I D K N - - - - - I P L N
 
AT5G39820.1     D A W A I C R I F K K T N A V S S Q R S I P Q S W - - - - - - - V Y P T I P D N N Q Q S H N N T A T L L A S S D V L S H
Os031586_Os08t0    D S W T I C R I F K K T S S M - A Q R A L C Q T W G A Q L P G T I D P D I F S T L Q S V Q A S Q F A L E S S S C S L Q A
 
AT5G39820.1     I S T - - - - - - - - - - - - - - - - - - - - R Q N F I P S - P V N E P A - - - - - - S F T E S A A S Y F A S Q M L G V
Os031586_Os08t0    A A T A A H Q I T S K Y A L Q G N N N N Q Q Q Q Q Q H K P S N P L D G S S C K V I N F N C S Q S A E V Q N S Q I I L P F
 
AT5G39820.1     T Y N T A R N N G T G D A L F L R N N G T G D A L V L - - - - - S N N E N N Y F N N L T G G L T H E V - - P N V R - - -
Os031586_Os08t0    E A H T S Q K T A T - P L L F D T Q F G Q P D Q I S R F V V D S S V N A N G - - - - - - G G I S N K S Q D P S A R K P G
 
AT5G39820.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S M V M E E T T G S E M S A T S Y S T N N
Os031586_Os08t0    S G F S M N S D W D G V A R I N F P F D L G A D S S E D W R S S I P W E S F L S P T T V H A E M P N - - - - - - -
 
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