fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027648 ARLEDDLALGLSPLHN in 467/571 AT1G26870.1 1st_not 0.478537360 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39820.1     ----------------MVLV---MDDEESNNVERYDDVVLPGFRFHPTDEELVSFYLKRK
Sb027648_Sorbi1 LEAGEHCLRYTAYSQWFVLLCKHMDEIRSDDIEKQDEVMLPGFRFHPTDEELVRFYLKRK
                                :**:   **: .*:::*: *:*:************** ******

AT5G39820.1     VLHKSLPFDLIKKVDIYKYDPWDLPTM---GEKEWYFYCPRDRKYRNSTRPNRVTGGGFW
Sb027648_Sorbi1 IQQKSLPIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFW
                : :****::**:::***********.:   **************************.***

AT5G39820.1     KATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNY
Sb027648_Sorbi1 KATGTDRPIYSSDGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTD------PSL
                *********** *.::***********:*********************:*      *. 

AT5G39820.1     NNKKQHLNNNNNSKELPSNDAWAICRIFKKTNAVSSQRSIPQSWVYPTIPDNN-------
Sb027648_Sorbi1 PQKKPL------EKTIPPNDSWAICRIFKKTNS-TAQRALSHSWVSPPLSRTNENYIRPS
                 :**        .* :*.**:***********: ::**::.:*** *.:. .*       

AT5G39820.1     ----QQSHN---NTATLLASSDVLSHIS-TRQNFIPSPVNE---PASFTES----AASY-
Sb027648_Sorbi1 SQATQRSHHSSENTSSTM--TDIISSIQFTGSSYMPSIVSSCRNPASIIDSSSRPAASLV
                    *:**:   **:: :  :*::* *. * ..::** *..   ***: :*    ***  

AT5G39820.1     --------------------------FASQMLGVTYNTARN--------------NGTGD
Sb027648_Sorbi1 LPSSGAEHHTMSVLSAIPLDLPAGMDIASMVLNASPTTLQNLDRIPTNIEFGQLHHPSNS
                                          :** :*..: .* :*              : :..

AT5G39820.1     ALFLRNNGT------GDALVLSNNENNYFNNLTGGLTHEVPNVRSMVM--------EETT
Sb027648_Sorbi1 SSSMANRCTVDLPDIGNSVTAAPRSINFPFNLQGAL----PDDWRMTLPWDSLPCTTEVS
                :  : *. *      *:::. : .. *:  ** *.*    *:   *.:         *.:

AT5G39820.1     GSEMSATSYSTNN
Sb027648_Sorbi1 TNYQSTKCYT---
                 .  *:..*:
BoxShade v3.31 C (beta, 970507) Output
AT5G39820.1     - - - - - - - - - - - - - - - - M V L V - - - M D D E E S N N V E R Y D D V V L P G F R F H P T D E E L V S F Y L K R K
Sb027648_Sorbi1    L E A G E H C L R Y T A Y S Q W F V L L C K H M D E I R S D D I E K Q D E V M L P G F R F H P T D E E L V R F Y L K R K
 
AT5G39820.1     V L H K S L P F D L I K K V D I Y K Y D P W D L P T M - - - G E K E W Y F Y C P R D R K Y R N S T R P N R V T G G G F W
Sb027648_Sorbi1    I Q Q K S L P I E L I R Q L D I Y K Y D P W D L P K L A S T G E K E W Y F Y C P R D R K Y R N S T R P N R V T G A G F W
 
AT5G39820.1     K A T G T D R P I Y S L D S T R C I G L K K S L V F Y R G R A A K G V K T D W M M H E F R L P S L S D S H H S S Y P N Y
Sb027648_Sorbi1    K A T G T D R P I Y S S D G S K C I G L K K S L V F Y K G R A A K G V K T D W M M H E F R L P S L T D - - - - - - P S L
 
AT5G39820.1     N N K K Q H L N N N N N S K E L P S N D A W A I C R I F K K T N A V S S Q R S I P Q S W V Y P T I P D N N - - - - - - -
Sb027648_Sorbi1    P Q K K P L - - - - - - E K T I P P N D S W A I C R I F K K T N S - T A Q R A L S H S W V S P P L S R T N E N Y I R P S
 
AT5G39820.1     - - - - Q Q S H N - - - N T A T L L A S S D V L S H I S - T R Q N F I P S P V N E - - - P A S F T E S - - - - A A S Y -
Sb027648_Sorbi1    S Q A T Q R S H H S S E N T S S T M - - T D I I S S I Q F T G S S Y M P S I V S S C R N P A S I I D S S S R P A A S L V
 
AT5G39820.1     - - - - - - - - - - - - - - - - - - - - - - - - - - F A S Q M L G V T Y N T A R N - - - - - - - - - - - - - - N G T G D
Sb027648_Sorbi1    L P S S G A E H H T M S V L S A I P L D L P A G M D I A S M V L N A S P T T L Q N L D R I P T N I E F G Q L H H P S N S
 
AT5G39820.1     A L F L R N N G T - - - - - - G D A L V L S N N E N N Y F N N L T G G L T H E V P N V R S M V M - - - - - - - - E E T T
Sb027648_Sorbi1    S S S M A N R C T V D L P D I G N S V T A A P R S I N F P F N L Q G A L - - - - P D D W R M T L P W D S L P C T T E V S
 
AT5G39820.1     G S E M S A T S Y S T N N
Sb027648_Sorbi1    T N Y Q S T K C Y T - - -
 
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