fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb005887 not found in 365aa AT1G26870.1 not_not 0.434022257 III
Sb015858 not found in 384aa AT1G26870.1 not_not 0.426073131 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G39820.1     MVLVMDDEESNNVERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKY
Sb015858_Sorbi1 ----MEERNDINMEKSDEILMPGFRFHPTDEELVSFYLKRKIQQKPISIELIRQLDIYKF
Sb005887_Sorbi1 ----MDERAD--MDKSDEVLLPGFRFHPTDEELISFYLKRKIQQKPVSIELIRQLDIYKY
                    *::. .  ::: *::::************:*******: :*.:.::**:::****:

AT5G39820.1     DPWDLPTM---GEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIG
Sb015858_Sorbi1 DPWDLPKLASTGEKEWYFYCPRDRKYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCIG
Sb005887_Sorbi1 DPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPVYSSEGTKCIG
                ******.:   ******************.******..***********:** :.*:***

AT5G39820.1     LKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSN
Sb015858_Sorbi1 LKKSLVFYKGRAARGMKTDWMMHEFRLPSLTDPSLPKRP-------------IDKTIPLN
Sb005887_Sorbi1 LKKSLVFYKGRAARGIKTDWMMHEYRLPSLNDPSRPKTP-------------KDKNIPAN
                ********:****:*:********:*****.*.  .. *              .* :* *

AT5G39820.1     DAWAICRIFKKTNAVSSQRSIPQSW-------------------------------VYPT
Sb015858_Sorbi1 DSWTICRIFKKTSSM-AQRALSHTWGPPLPGATEADMFTALQSVQASEFALESSLQVAPL
Sb005887_Sorbi1 DAWAICRIFKKPNSV-AQRVLSHSWGPQSITTTEPELLSALQSIQASHFALESS-----T
                *:*:*******..:: :** :.::*                                   

AT5G39820.1     IPDNN----------QQSHNNTATLLASSDVL-----------------SHISTR--QNF
Sb015858_Sorbi1 APAGQFTSRHGQHHHQQKGNNNPSLDGSSCKLINFNN--SSPSEEH-----------HNF
Sb005887_Sorbi1 CSANRFNS---QQCLQENLNN--SQDGSPCKVITFNRSLSLPSEKDIHSSYVSKKDIHSS
                 . ..          *:. **  :  .*.  :                         :. 

AT5G39820.1     ---IPSPVNEPASFTESAA---SYFA-----SQMLGVTYNTARN-NGTGDALFLRNNGTG
Sb015858_Sorbi1 PITFPFEVQEAPQKAAAAAAP-IFFG-AHPAHHLSGFVVDSSADVNGGGIG-----GRSQ
Sb005887_Sorbi1 SVILPLEIQ-SQQKSMNEAIPNTEFGLLEPS---NGYIVDWATD-SSGGIG-----NSDG
                   :*  :: . . :   *     *.         *   : : : .. * .     .   

AT5G39820.1     DALVLSNNENNYFNNLTG-GLTHEVPNVRSMVMEETTGSEMSATSYSTNN----------
Sb015858_Sorbi1 DSSSTRKPSNGFSTNSSDWGETAG-----RINFPFDLGAD-SSEEWRCNIPWESFLTSPA
Sb005887_Sorbi1 D-TYTRKSGNGYSS-----GNECGIP--RKIKFPFNLGVG-SPDDWTSNMPCDS------
                *     :  *.: .     *          : :    *   *. .:  *           

AT5G39820.1     --------
Sb015858_Sorbi1 ALQTELPH
Sb005887_Sorbi1 --------
BoxShade v3.31 C (beta, 970507) Output
AT5G39820.1     M V L V M D D E E S N N V E R Y D D V V L P G F R F H P T D E E L V S F Y L K R K V L H K S L P F D L I K K V D I Y K Y
Sb015858_Sorbi1    - - - - M E E R N D I N M E K S D E I L M P G F R F H P T D E E L V S F Y L K R K I Q Q K P I S I E L I R Q L D I Y K F
Sb005887_Sorbi1    - - - - M D E R A D - - M D K S D E V L L P G F R F H P T D E E L I S F Y L K R K I Q Q K P V S I E L I R Q L D I Y K Y
 
AT5G39820.1     D P W D L P T M - - - G E K E W Y F Y C P R D R K Y R N S T R P N R V T G G G F W K A T G T D R P I Y S L D S T R C I G
Sb015858_Sorbi1    D P W D L P K L A S T G E K E W Y F Y C P R D R K Y R N S V R P N R V T A A G F W K A T G T D R P I Y S S E G T K C I G
Sb005887_Sorbi1    D P W D L P K L A S T G E K E W Y F Y C P R D R K Y R N S A R P N R V T G A G F W K A T G T D R P V Y S S E G T K C I G
 
AT5G39820.1     L K K S L V F Y R G R A A K G V K T D W M M H E F R L P S L S D S H H S S Y P N Y N N K K Q H L N N N N N S K E L P S N
Sb015858_Sorbi1    L K K S L V F Y K G R A A R G M K T D W M M H E F R L P S L T D P S L P K R P - - - - - - - - - - - - - I D K T I P L N
Sb005887_Sorbi1    L K K S L V F Y K G R A A R G I K T D W M M H E Y R L P S L N D P S R P K T P - - - - - - - - - - - - - K D K N I P A N
 
AT5G39820.1     D A W A I C R I F K K T N A V S S Q R S I P Q S W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V Y P T
Sb015858_Sorbi1    D S W T I C R I F K K T S S M - A Q R A L S H T W G P P L P G A T E A D M F T A L Q S V Q A S E F A L E S S L Q V A P L
Sb005887_Sorbi1    D A W A I C R I F K K P N S V - A Q R V L S H S W G P Q S I T T T E P E L L S A L Q S I Q A S H F A L E S S - - - - - T
 
AT5G39820.1     I P D N N - - - - - - - - - - Q Q S H N N T A T L L A S S D V L - - - - - - - - - - - - - - - - - S H I S T R - - Q N F
Sb015858_Sorbi1    A P A G Q F T S R H G Q H H H Q Q K G N N N P S L D G S S C K L I N F N N - - S S P S E E H - - - - - - - - - - - H N F
Sb005887_Sorbi1    C S A N R F N S - - - Q Q C L Q E N L N N - - S Q D G S P C K V I T F N R S L S L P S E K D I H S S Y V S K K D I H S S
 
AT5G39820.1     - - - I P S P V N E P A S F T E S A A - - - S Y F A - - - - - S Q M L G V T Y N T A R N - N G T G D A L F L R N N G T G
Sb015858_Sorbi1    P I T F P F E V Q E A P Q K A A A A A A P - I F F G - A H P A H H L S G F V V D S S A D V N G G G I G - - - - - G R S Q
Sb005887_Sorbi1    S V I L P L E I Q - S Q Q K S M N E A I P N T E F G L L E P S - - - N G Y I V D W A T D - S S G G I G - - - - - N S D G
 
AT5G39820.1     D A L V L S N N E N N Y F N N L T G - G L T H E V P N V R S M V M E E T T G S E M S A T S Y S T N N - - - - - - - - - -
Sb015858_Sorbi1    D S S S T R K P S N G F S T N S S D W G E T A G - - - - - R I N F P F D L G A D - S S E E W R C N I P W E S F L T S P A
Sb005887_Sorbi1    D - T Y T R K S G N G Y S S - - - - - G N E C G I P - - R K I K F P F N L G V G - S P D D W T S N M P C D S - - - - - -
 
AT5G39820.1     - - - - - - - -
Sb015858_Sorbi1    A L Q T E L P H
Sb005887_Sorbi1    - - - - - - - -
 
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