fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027648 ARLEDDLALGLSPLHN in 467/571 AT1G26870.1 1st_not 0.478537360 II
Sb005887 not found in 365aa AT1G26870.1 not_not 0.434022257 III
Sb015858 not found in 384aa AT1G26870.1 not_not 0.426073131 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G39820.1     ----------------MVLV---MDDEESN-NVERYDDVVLPGFRFHPTDEELVSFYLKR
Sb005887_Sorbi1 -----------------------MDE-RAD--MDKSDEVLLPGFRFHPTDEELISFYLKR
Sb015858_Sorbi1 -----------------------MEE-RNDINMEKSDEILMPGFRFHPTDEELVSFYLKR
Sb027648_Sorbi1 LEAGEHCLRYTAYSQWFVLLCKHMDEIRSD-DIEKQDEVMLPGFRFHPTDEELVRFYLKR
                                       *:: . :  ::: *::::************: *****

AT5G39820.1     KVLHKSLPFDLIKKVDIYKYDPWDLPTM---GEKEWYFYCPRDRKYRNSTRPNRVTGGGF
Sb005887_Sorbi1 KIQQKPVSIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGF
Sb015858_Sorbi1 KIQQKPISIELIRQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSVRPNRVTAAGF
Sb027648_Sorbi1 KIQQKSLPIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGF
                *: :*.:.::**:::****:******.:   ******************.******..**

AT5G39820.1     WKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPN
Sb005887_Sorbi1 WKATGTDRPVYSSEGTKCIGLKKSLVFYKGRAARGIKTDWMMHEYRLPSLND---PSRP-
Sb015858_Sorbi1 WKATGTDRPIYSSEGTKCIGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLTD---PSLP-
Sb027648_Sorbi1 WKATGTDRPIYSSDGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTD---PSLP-
                *********:** :.::***********:****:*:********:*****.*   .* * 

AT5G39820.1     YNNKKQHLNNNNNSKELPSNDAWAICRIFKKTNAVSSQRSIPQSWVYPTIPDNN------
Sb005887_Sorbi1 ----KTPKD-----KNIPANDAWAICRIFKKPNSV-AQRVLSHSW-GPQSITTTEPELLS
Sb015858_Sorbi1 ----KRPID-----KTIPLNDSWTICRIFKKTSSM-AQRALSHTW-GPPLPGATEADMFT
Sb027648_Sorbi1 ---QKKPLE-----KTIPPNDSWAICRIFKKTNST-AQRALSHSWVSPPLSRTNENYIRP
                    *   :     * :* **:*:*******..:  :** :.::*  *     .      

AT5G39820.1     -----QQSH--------------------------------NN-------TATLLASSDV
Sb005887_Sorbi1 ALQSIQASHFALESS------TCSANRFNS---QQCLQENLNN--SQDGSPCKVITFNRS
Sb015858_Sorbi1 ALQSVQASEFALESSLQ-VAPLAPAGQFTSRHGQHHHQQKGNNNPSLDGSSCKLINFNN-
Sb027648_Sorbi1 SSQATQRSHHSSENTSSTMTDIISSIQFTGSSYMPSIVSSCRN-------PASIIDSSSR
                     * *.                                .*       ...::  .  

AT5G39820.1     ----LS-----------------HISTRQNFIP-----------------SP--------
Sb005887_Sorbi1 ----LSLPSEKDIHSSYVSKKDIHSSSVI--LPLEIQ-SQQKSMN---EAIP--------
Sb015858_Sorbi1 -----SSPSEEH-----------HNFPIT--FPFEVQEAPQKAAA---AAAP--------
Sb027648_Sorbi1 PAASLVLPSSGAEH---------HTMSVLSAIPLDLP-AGMDIASMVLNASPTTLQNLDR
                                       *  .    :*                  *        

AT5G39820.1     ---------VNEPA----SFTESAASYFASQMLGVTY---NTARNNGTGDALFLRNNGTG
Sb005887_Sorbi1 ---NTEFG-LLEPS---NGYIVDWATD-SSGGIGNSDGD-TYTRKSGNGYSS-------G
Sb015858_Sorbi1 ----IFFG--AHPAHHLSGFVVDSSADVNGGGIGGRSQDSSSTRKPSNGFSTNSSD--WG
Sb027648_Sorbi1 IPTNIEFGQLHHPS--------------------------NSSSSMANRCTVDLPD--IG
                           .*:                          . : . ..  :        *

AT5G39820.1     DALVLSNNENNYFNNLTGGLTHEVPNVRSMVMEETTGSEMSATSYSTNN-------
Sb005887_Sorbi1 NECGI-PRKIKFPFNLGVGSPDD---WTSNMPCDS---------------------
Sb015858_Sorbi1 ETAG----RINFPFDLGADSSEE---WRCNIPWESFLTSPAALQTELPH-------
Sb027648_Sorbi1 NSVTAAPRSINFPFNLQGALPDD---WRMTLPWDSL---PCTTEVSTNYQSTKCYT
                :         ::  :*    ..:       :  ::
BoxShade v3.31 C (beta, 970507) Output
AT5G39820.1     - - - - - - - - - - - - - - - - M V L V - - - M D D E E S N - N V E R Y D D V V L P G F R F H P T D E E L V S F Y L K R
Sb005887_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - M D E - R A D - - M D K S D E V L L P G F R F H P T D E E L I S F Y L K R
Sb015858_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - M E E - R N D I N M E K S D E I L M P G F R F H P T D E E L V S F Y L K R
Sb027648_Sorbi1    L E A G E H C L R Y T A Y S Q W F V L L C K H M D E I R S D - D I E K Q D E V M L P G F R F H P T D E E L V R F Y L K R
 
AT5G39820.1     K V L H K S L P F D L I K K V D I Y K Y D P W D L P T M - - - G E K E W Y F Y C P R D R K Y R N S T R P N R V T G G G F
Sb005887_Sorbi1    K I Q Q K P V S I E L I R Q L D I Y K Y D P W D L P K L A S T G E K E W Y F Y C P R D R K Y R N S A R P N R V T G A G F
Sb015858_Sorbi1    K I Q Q K P I S I E L I R Q L D I Y K F D P W D L P K L A S T G E K E W Y F Y C P R D R K Y R N S V R P N R V T A A G F
Sb027648_Sorbi1    K I Q Q K S L P I E L I R Q L D I Y K Y D P W D L P K L A S T G E K E W Y F Y C P R D R K Y R N S T R P N R V T G A G F
 
AT5G39820.1     W K A T G T D R P I Y S L D S T R C I G L K K S L V F Y R G R A A K G V K T D W M M H E F R L P S L S D S H H S S Y P N
Sb005887_Sorbi1    W K A T G T D R P V Y S S E G T K C I G L K K S L V F Y K G R A A R G I K T D W M M H E Y R L P S L N D - - - P S R P -
Sb015858_Sorbi1    W K A T G T D R P I Y S S E G T K C I G L K K S L V F Y K G R A A R G M K T D W M M H E F R L P S L T D - - - P S L P -
Sb027648_Sorbi1    W K A T G T D R P I Y S S D G S K C I G L K K S L V F Y K G R A A K G V K T D W M M H E F R L P S L T D - - - P S L P -
 
AT5G39820.1     Y N N K K Q H L N N N N N S K E L P S N D A W A I C R I F K K T N A V S S Q R S I P Q S W V Y P T I P D N N - - - - - -
Sb005887_Sorbi1    - - - - K T P K D - - - - - K N I P A N D A W A I C R I F K K P N S V - A Q R V L S H S W - G P Q S I T T T E P E L L S
Sb015858_Sorbi1    - - - - K R P I D - - - - - K T I P L N D S W T I C R I F K K T S S M - A Q R A L S H T W - G P P L P G A T E A D M F T
Sb027648_Sorbi1    - - - Q K K P L E - - - - - K T I P P N D S W A I C R I F K K T N S T - A Q R A L S H S W V S P P L S R T N E N Y I R P
 
AT5G39820.1     - - - - - Q Q S H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N N - - - - - - - T A T L L A S S D V
Sb005887_Sorbi1    A L Q S I Q A S H F A L E S S - - - - - - T C S A N R F N S - - - Q Q C L Q E N L N N - - S Q D G S P C K V I T F N R S
Sb015858_Sorbi1    A L Q S V Q A S E F A L E S S L Q - V A P L A P A G Q F T S R H G Q H H H Q Q K G N N N P S L D G S S C K L I N F N N -
Sb027648_Sorbi1    S S Q A T Q R S H H S S E N T S S T M T D I I S S I Q F T G S S Y M P S I V S S C R N - - - - - - - P A S I I D S S S R
 
AT5G39820.1     - - - - L S - - - - - - - - - - - - - - - - - H I S T R Q N F I P - - - - - - - - - - - - - - - - - S P - - - - - - - -
Sb005887_Sorbi1    - - - - L S L P S E K D I H S S Y V S K K D I H S S S V I - - L P L E I Q - S Q Q K S M N - - - E A I P - - - - - - - -
Sb015858_Sorbi1    - - - - - S S P S E E H - - - - - - - - - - - H N F P I T - - F P F E V Q E A P Q K A A A - - - A A A P - - - - - - - -
Sb027648_Sorbi1    P A A S L V L P S S G A E H - - - - - - - - - H T M S V L S A I P L D L P - A G M D I A S M V L N A S P T T L Q N L D R
 
AT5G39820.1     - - - - - - - - - V N E P A - - - - S F T E S A A S Y F A S Q M L G V T Y - - - N T A R N N G T G D A L F L R N N G T G
Sb005887_Sorbi1    - - - N T E F G - L L E P S - - - N G Y I V D W A T D - S S G G I G N S D G D - T Y T R K S G N G Y S S - - - - - - - G
Sb015858_Sorbi1    - - - - I F F G - - A H P A H H L S G F V V D S S A D V N G G G I G G R S Q D S S S T R K P S N G F S T N S S D - - W G
Sb027648_Sorbi1    I P T N I E F G Q L H H P S - - - - - - - - - - - - - - - - - - - - - - - - - - N S S S S M A N R C T V D L P D - - I G
 
AT5G39820.1     D A L V L S N N E N N Y F N N L T G G L T H E V P N V R S M V M E E T T G S E M S A T S Y S T N N - - - - - - -
Sb005887_Sorbi1    N E C G I - P R K I K F P F N L G V G S P D D - - - W T S N M P C D S - - - - - - - - - - - - - - - - - - - - -
Sb015858_Sorbi1    E T A G - - - - R I N F P F D L G A D S S E E - - - W R C N I P W E S F L T S P A A L Q T E L P H - - - - - - -
Sb027648_Sorbi1    N S V T A A P R S I N F P F N L Q G A L P D D - - - W R M T L P W D S L - - - P C T T E V S T N Y Q S T K C Y T
 
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