fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000646 not found in 438aa AT1G26870.1 1st_not 0.454689984 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G39820.1     MVLVMDDEESNNVERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKY
gm000646_Glyma0 ----MMEERNNDAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLTIELIKQLDIYKF
                    * :*..*:.*: *:*:**************.******: ::.*.::***::****:

AT5G39820.1     DPWDLP---TMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIG
gm000646_Glyma0 DPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIG
                ******   * ******************:*******.************** :.::***

AT5G39820.1     LKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSN
gm000646_Glyma0 LKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSPKYID--------------KTIPAN
                ********:*********************:**  ..* :              * :*:*

AT5G39820.1     DAWAICRIFKKTNAVSSQRSIPQSWVYPTIPDNNQQSH----------------------
gm000646_Glyma0 ESWAICRIFKKINA-TAQRTLSQSWASSLPPDTRTSDHHIQTKDQDSTTQFCSDNMPMTN
                ::********* ** ::**::.***. .  **.. ..*                      

AT5G39820.1     ---------------------NNTATLLASSDVLSHIST-------------------RQ
gm000646_Glyma0 KTTLTSQFCNNNYNDSQPLPTNSSSSPLCPLDVASYKSIINPLLYKAFDHFPISNEDLRT
                                     *.::: *.. ** *: *                    * 

AT5G39820.1     NFIPSPVNEPASFTESAASYFASQML---------------GVTYNTARNNGTGDALFLR
gm000646_Glyma0 SLLFSPPFETSDANPKSTMVDVSSMLLSLPSSVLGDFNKTTSEDTNTASNFGV-----LQ
                .:: **  *.:. . .::   .*.**               .   *** * *.     *:

AT5G39820.1     NNGTGDAL--------VLSNNENNYFNN---LTGGLTHEVPNVRSM------VMEETTGS
gm000646_Glyma0 EHCSGYPIPFLPEMQTTFGNQQQQYCDNINALVKGPNVNVPRVDDQELELETVVQRSIGF
                :: :* .:        .:.*::::* :*   *. * . :**.* .       *::.: * 

AT5G39820.1     EMSAT-------SYSTNN------------------------
gm000646_Glyma0 PLSATMPLNIVDAWKSNNLLWDTSSFPCDMPSSYYSTTKCYT
                 :***       ::.:**
BoxShade v3.31 C (beta, 970507) Output
AT5G39820.1     M V L V M D D E E S N N V E R Y D D V V L P G F R F H P T D E E L V S F Y L K R K V L H K S L P F D L I K K V D I Y K Y
gm000646_Glyma0    - - - - M M E E R N N D A E K L D E V M L P G F R F H P T D E E L V G F Y L K R K I Q Q R P L T I E L I K Q L D I Y K F
 
AT5G39820.1     D P W D L P - - - T M G E K E W Y F Y C P R D R K Y R N S T R P N R V T G G G F W K A T G T D R P I Y S L D S T R C I G
gm000646_Glyma0    D P W D L P K L A T T G E K E W Y F Y C P R D R K Y R N S A R P N R V T G A G F W K A T G T D R P I Y S S E G S K C I G
 
AT5G39820.1     L K K S L V F Y R G R A A K G V K T D W M M H E F R L P S L S D S H H S S Y P N Y N N K K Q H L N N N N N S K E L P S N
gm000646_Glyma0    L K K S L V F Y K G R A A K G V K T D W M M H E F R L P S L T D S L S P K Y I D - - - - - - - - - - - - - - K T I P A N
 
AT5G39820.1     D A W A I C R I F K K T N A V S S Q R S I P Q S W V Y P T I P D N N Q Q S H - - - - - - - - - - - - - - - - - - - - - -
gm000646_Glyma0    E S W A I C R I F K K I N A - T A Q R T L S Q S W A S S L P P D T R T S D H H I Q T K D Q D S T T Q F C S D N M P M T N
 
AT5G39820.1     - - - - - - - - - - - - - - - - - - - - - N N T A T L L A S S D V L S H I S T - - - - - - - - - - - - - - - - - - - R Q
gm000646_Glyma0    K T T L T S Q F C N N N Y N D S Q P L P T N S S S S P L C P L D V A S Y K S I I N P L L Y K A F D H F P I S N E D L R T
 
AT5G39820.1     N F I P S P V N E P A S F T E S A A S Y F A S Q M L - - - - - - - - - - - - - - - G V T Y N T A R N N G T G D A L F L R
gm000646_Glyma0    S L L F S P P F E T S D A N P K S T M V D V S S M L L S L P S S V L G D F N K T T S E D T N T A S N F G V - - - - - L Q
 
AT5G39820.1     N N G T G D A L - - - - - - - - V L S N N E N N Y F N N - - - L T G G L T H E V P N V R S M - - - - - - V M E E T T G S
gm000646_Glyma0    E H C S G Y P I P F L P E M Q T T F G N Q Q Q Q Y C D N I N A L V K G P N V N V P R V D D Q E L E L E T V V Q R S I G F
 
AT5G39820.1     E M S A T - - - - - - - S Y S T N N - - - - - - - - - - - - - - - - - - - - - - - -
gm000646_Glyma0    P L S A T M P L N I V D A W K S N N L L W D T S S F P C D M P S S Y Y S T T K C Y T
 
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