fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G39860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011458 not found in 91aa AT1G26945.1 not_not 0.525714285 III
Os009859 not found in 88aa AT1G26945.1 not_not 0.502857142 III
Os024206 not found in 87aa AT1G26945.1 not_not 0.497142857 III
Os035852 not found in 88aa AT1G26945.1 not_not 0.491428571 III
Sb022206 not found in 213aa AT1G26945.1 not_not 0.537142857 III
Sb003265 not found in 86aa AT1G26945.1 not_not 0.485714285 III
Gm035037 not found in 91aa AT1G26945.1 not_not 0.76 III
Gm025833 not found in 91aa AT1G26945.1 not_not 0.714285714 III
Gm050375 not found in 92aa AT1G26945.1 not_not 0.714285714 III
Gm002763 not found in 93aa AT1G26945.1 not_not 0.645714285 III
Gm022905 not found in 93aa AT1G26945.1 not_not 0.64 III
Gm000625 not found in 93aa AT1G26945.1 not_not 0.64 III
Gm049258 not found in 93aa AT1G26945.1 not_not 0.628571428 III
Gm010049 not found in 92aa AT1G74500.1 not_not 0.628571428 III
Gm015729 not found in 92aa AT1G74500.1 not_not 0.617142857 III
Pt023817 not found in 91aa AT1G74500.1 not_not 0.628571428 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G39860.1     ----------------------------------------MSNRRSR--QSSSAPRISDN
gm000625_Glyma0 ----------------------------------------MSSRRSRSRQSGASAEITDA
gm025833_Glyma0 ----------------------------------------MSSRRSR--QHSGSTRISDD
gm022905_Glyma0 ----------------------------------------MSSRRSRSRQSGVSTEITDA
pt023817_POPTR_ ----------------------------------------MSSRRSRSRQSSSSR-ISDD
Os011458_Os03t0 ----------------------------------------MSSRRG---GGGGGGRITDE
gm050375_Glyma1 ----------------------------------------MSSRRSR--QHSGSTRISDD
Os035852_Os10t0 ----------------------------------------MSGRR-------ASGRITDD
gm015729_Glyma0 ----------------------------------------MSSRRSRSRQTSSSRNITDD
Os009859_Os02t0 ----------------------------------------MSSRR------SSRGSISEE
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRRSRSRQSGSS-RITEE
Os024206_Os06t0 ----------------------------------------MSSRR------SSRSSVSEE
Sb003265_Sorbi1 ----------------------------------------MSSRR-------SRASVSEE
gm002763_Glyma0 ----------------------------------------MSSRRSRSRQSGASAEITDA
gm035037_Glyma1 ----------------------------------------MSSRRSR--QQSASTRISDD
gm010049_Glyma0 ----------------------------------------MSSRRSRSRQTSSSRNITDD
gm049258_Glyma1 ----------------------------------------MSSRRSRSSQSDVSTEITDA
                                                        **.**           ::: 

AT5G39860.1     QMIDLVSKLRQILPEIGQRRRS-DKASASKVLQETCNYIRNLNREVDNLSERLSQLLESV
gm000625_Glyma0 QITDLVSKLQQLIPEL-RARRS-DKVSSAKVLQETCNYIKNLHREVDDLSDRLSELLANT
gm025833_Glyma0 QIIELVSKLRQLVPEI-RNRRS-DKVSASKVLQETCNYIRSLHREVSDLSERLSQLLTTI
gm022905_Glyma0 QITDLISKLQQLIPEL-RARRS-DKVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATT
pt023817_POPTR_ QILDLVTKLQQLLPEI-RNRRS-DKVSAAKILQETCNYIKSLHREVGDLSERLSELLETT
Os011458_Os03t0 EINELISKLQALLPESSRSRGA-SRSSASKLLKETCSYIKSLHREVDDLSDRLSELMSTM
gm050375_Glyma1 QIIELVSKLRQLVPEI-RNRRS-DKVSASKVLQETCNYIRGLHREVSDLSERLSQLLTTI
Os035852_Os10t0 EINELISKLQSLLPESSRRRGATSRSPATKLLKEMCSYIKSLHREVDDLSERLSELMATM
gm015729_Glyma0 QINDLVSKLQQLLPEI-RDRRS-DKVSASKVLQETCNYIRSLHREVGDLSERLSELLDTT
Os009859_Os02t0 EINELISKLQSLLP-NSRRRGS-SQASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATM
Sb022206_Sorbi1 QISDLVSKLQDLLPEA-RLQSN-ARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATS
Os024206_Os06t0 EINELISKLQSLLP-SSRRRGA-NQASTTKLLKETCSYIKSLHREVDDLSDRLSDLMAGM
Sb003265_Sorbi1 EINELISRLQTLLP-SARRRGG-SEASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATM
gm002763_Glyma0 QITDLVSKLQQLIPEL-RARRS-DKVSAAKVLQETCNYIKNLHREVDDLSDRLSELLANT
gm035037_Glyma1 QIIDLVSKLRQLVPEI-RDRRS-DKVSASKVLQETCNYIRSLHREVDDLSERLSQLLATI
gm010049_Glyma0 QINDLVSKLQQLLPEI-RDRRS-DKVSASKVLQETCNYIRSLHREVDDLSERLSELLATT
gm049258_Glyma1 QITDIISKLQQLIPEL-DARRS-DKVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATT
                :: :::::*: ::*     :    . .::::*:* *.**:.*::**.:**:***:*:   

AT5G39860.1     DEDSPEAAVIRSLLM-
gm000625_Glyma0 DSNSAQAAIIRSLLM-
gm025833_Glyma0 DADSAEAGIIRSLLN-
gm022905_Glyma0 DSNSAQAAIIRSLLM-
pt023817_POPTR_ D--TAQAAIIRNLLMQ
Os011458_Os03t0 DNNSPQAEIIRSLLR-
gm050375_Glyma1 DADSAEAGIIRSLLNQ
Os035852_Os10t0 DSNSPQADIIRSLLR-
gm015729_Glyma0 D--TAQAAIIRNLLMQ
Os009859_Os02t0 DHNSPGAEIIRSILRS
Sb022206_Sorbi1 DMSSAQAAVIRSLLM-
Os024206_Os06t0 DHNSPGAEIIRSLLR-
Sb003265_Sorbi1 DHNSPGAEIIRSLLR-
gm002763_Glyma0 DSNSAQAAIIRSLLM-
gm035037_Glyma1 DADSPEAAIIRSLIN-
gm010049_Glyma0 D--TAQAAIIRNLLMQ
gm049258_Glyma1 DSNSAQAAIIRSLLL-
                *  :. * :**.::
BoxShade v3.31 C (beta, 970507) Output
AT5G39860.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S N R R S R - - Q S S S A P R I S D N
gm000625_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q S G A S A E I T D A
gm025833_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R - - Q H S G S T R I S D D
gm022905_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q S G V S T E I T D A
pt023817_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q S S S S R - I S D D
Os011458_Os03t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R G - - - G G G G G G R I T D E
gm050375_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R - - Q H S G S T R I S D D
Os035852_Os10t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S G R R - - - - - - - A S G R I T D D
gm015729_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q T S S S R N I T D D
Os009859_Os02t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R - - - - - - S S R G S I S E E
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R S R S R Q S G S S - R I T E E
Os024206_Os06t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R - - - - - - S S R S S V S E E
Sb003265_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R - - - - - - - S R A S V S E E
gm002763_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q S G A S A E I T D A
gm035037_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R - - Q Q S A S T R I S D D
gm010049_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q T S S S R N I T D D
gm049258_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S S Q S D V S T E I T D A
 
AT5G39860.1     Q M I D L V S K L R Q I L P E I G Q R R R S - D K A S A S K V L Q E T C N Y I R N L N R E V D N L S E R L S Q L L E S V
gm000625_Glyma0    Q I T D L V S K L Q Q L I P E L - R A R R S - D K V S S A K V L Q E T C N Y I K N L H R E V D D L S D R L S E L L A N T
gm025833_Glyma0    Q I I E L V S K L R Q L V P E I - R N R R S - D K V S A S K V L Q E T C N Y I R S L H R E V S D L S E R L S Q L L T T I
gm022905_Glyma0    Q I T D L I S K L Q Q L I P E L - R A R R S - D K V S A S K V L Q E T C N Y I K S L H R E V D D L S D R L S Q L L A T T
pt023817_POPTR_    Q I L D L V T K L Q Q L L P E I - R N R R S - D K V S A A K I L Q E T C N Y I K S L H R E V G D L S E R L S E L L E T T
Os011458_Os03t0    E I N E L I S K L Q A L L P E S S R S R G A - S R S S A S K L L K E T C S Y I K S L H R E V D D L S D R L S E L M S T M
gm050375_Glyma1    Q I I E L V S K L R Q L V P E I - R N R R S - D K V S A S K V L Q E T C N Y I R G L H R E V S D L S E R L S Q L L T T I
Os035852_Os10t0    E I N E L I S K L Q S L L P E S S R R R G A T S R S P A T K L L K E M C S Y I K S L H R E V D D L S E R L S E L M A T M
gm015729_Glyma0    Q I N D L V S K L Q Q L L P E I - R D R R S - D K V S A S K V L Q E T C N Y I R S L H R E V G D L S E R L S E L L D T T
Os009859_Os02t0    E I N E L I S K L Q S L L P - N S R R R G S - S Q A S T T K L L K E T C N Y I K S L H R E V D D L S D R L S D L M A T M
Sb022206_Sorbi1    Q I S D L V S K L Q D L L P E A - R L Q S N - A R V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S
Os024206_Os06t0    E I N E L I S K L Q S L L P - S S R R R G A - N Q A S T T K L L K E T C S Y I K S L H R E V D D L S D R L S D L M A G M
Sb003265_Sorbi1    E I N E L I S R L Q T L L P - S A R R R G G - S E A S T T K L L K E T C S Y I K S L H R E V D D L S D R L S D L M A T M
gm002763_Glyma0    Q I T D L V S K L Q Q L I P E L - R A R R S - D K V S A A K V L Q E T C N Y I K N L H R E V D D L S D R L S E L L A N T
gm035037_Glyma1    Q I I D L V S K L R Q L V P E I - R D R R S - D K V S A S K V L Q E T C N Y I R S L H R E V D D L S E R L S Q L L A T I
gm010049_Glyma0    Q I N D L V S K L Q Q L L P E I - R D R R S - D K V S A S K V L Q E T C N Y I R S L H R E V D D L S E R L S E L L A T T
gm049258_Glyma1    Q I T D I I S K L Q Q L I P E L - D A R R S - D K V S A S K V L Q E T C N Y I K S L H R E V D D L S D R L S Q L L A T T
 
AT5G39860.1     D E D S P E A A V I R S L L M -
gm000625_Glyma0    D S N S A Q A A I I R S L L M -
gm025833_Glyma0    D A D S A E A G I I R S L L N -
gm022905_Glyma0    D S N S A Q A A I I R S L L M -
pt023817_POPTR_    D - - T A Q A A I I R N L L M Q
Os011458_Os03t0    D N N S P Q A E I I R S L L R -
gm050375_Glyma1    D A D S A E A G I I R S L L N Q
Os035852_Os10t0    D S N S P Q A D I I R S L L R -
gm015729_Glyma0    D - - T A Q A A I I R N L L M Q
Os009859_Os02t0    D H N S P G A E I I R S I L R S
Sb022206_Sorbi1    D M S S A Q A A V I R S L L M -
Os024206_Os06t0    D H N S P G A E I I R S L L R -
Sb003265_Sorbi1    D H N S P G A E I I R S L L R -
gm002763_Glyma0    D S N S A Q A A I I R S L L M -
gm035037_Glyma1    D A D S P E A A I I R S L I N -
gm010049_Glyma0    D - - T A Q A A I I R N L L M Q
gm049258_Glyma1    D S N S A Q A A I I R S L L L -
 
0