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| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT5G39860.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Pt019267 | not found in 90aa | AT5G39860.1 | not_1st | 0.754285714 | II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G39860.1 MSNRRSRQSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLN
pt019267_POPTR_ MSSRRSRQ-SSVPRITDDQIIHLVSKLRQLLPEIRQ-RRSDKVSASKVLQETCNYIKNLH
**.***** **.***:*:*:*.*******:**** * *****.*************:**:
AT5G39860.1 REVDNLSERLSQLLESVDEDSPEAAVIRSLLM
pt019267_POPTR_ REVDDLSERLSQLLATIDSDSPEAEIIRSLIM
****:********* ::*.***** :****:*
| AT5G39860.1 | M | S | N | R | R | S | R | Q | S | S | S | A | P | R | I | S | D | N | Q | M | I | D | L | V | S | K | L | R | Q | I | L | P | E | I | G | Q | R | R | R | S | D | K | A | S | A | S | K | V | L | Q | E | T | C | N | Y | I | R | N | L | N |
| pt019267_POPTR_ | M | S | S | R | R | S | R | Q | - | S | S | V | P | R | I | T | D | D | Q | I | I | H | L | V | S | K | L | R | Q | L | L | P | E | I | R | Q | - | R | R | S | D | K | V | S | A | S | K | V | L | Q | E | T | C | N | Y | I | K | N | L | H |
| AT5G39860.1 | R | E | V | D | N | L | S | E | R | L | S | Q | L | L | E | S | V | D | E | D | S | P | E | A | A | V | I | R | S | L | L | M | ||||||||||||||||||||||||||||
| pt019267_POPTR_ | R | E | V | D | D | L | S | E | R | L | S | Q | L | L | A | T | I | D | S | D | S | P | E | A | E | I | I | R | S | L | I | M | ||||||||||||||||||||||||||||