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| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT5G39860.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Pt023817 | not found in 91aa | AT1G74500.1 | not_not | 0.628571428 | III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G39860.1 MSNRRSR-QSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNL
pt023817_POPTR_ MSSRRSRSRQSSSSRISDDQILDLVTKLQQLLPEI-RNRRSDKVSAAKILQETCNYIKSL
**.**** :.**:.****:*::***:**:*:**** :.*****.**:*:********:.*
AT5G39860.1 NREVDNLSERLSQLLESVDEDSPEAAVIRSLLM-
pt023817_POPTR_ HREVGDLSERLSELLETT--DTAQAAIIRNLLMQ
:***.:******:***:. *:.:**:**.***
| AT5G39860.1 | M | S | N | R | R | S | R | - | Q | S | S | S | A | P | R | I | S | D | N | Q | M | I | D | L | V | S | K | L | R | Q | I | L | P | E | I | G | Q | R | R | R | S | D | K | A | S | A | S | K | V | L | Q | E | T | C | N | Y | I | R | N | L |
| pt023817_POPTR_ | M | S | S | R | R | S | R | S | R | Q | S | S | S | S | R | I | S | D | D | Q | I | L | D | L | V | T | K | L | Q | Q | L | L | P | E | I | - | R | N | R | R | S | D | K | V | S | A | A | K | I | L | Q | E | T | C | N | Y | I | K | S | L |
| AT5G39860.1 | N | R | E | V | D | N | L | S | E | R | L | S | Q | L | L | E | S | V | D | E | D | S | P | E | A | A | V | I | R | S | L | L | M | - | ||||||||||||||||||||||||||
| pt023817_POPTR_ | H | R | E | V | G | D | L | S | E | R | L | S | E | L | L | E | T | T | - | - | D | T | A | Q | A | A | I | I | R | N | L | L | M | Q | ||||||||||||||||||||||||||