|
|
|
|
|
|
|
|
| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT5G39860.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Os011454 | not found in 92aa | AT1G26945.1 | 1st_not | 0.577142857 | II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G39860.1 MSNRRSR-QSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNL
Os011454_Os03t0 MSSRRSRSRQSGSSRITDEQISDLVSKLQDLLPE-ARLRSNDRVPSSRVLQETCNYIRSL
**.**** :.*.:.**:*:*: ******:::*** .: * .*:..:*:**********.*
AT5G39860.1 NREVDNLSERLSQLLESVDEDSPEAAVIRSLLM
Os011454_Os03t0 HQEVDDLSERLSELLATSDMSSAQAAIIRSLLM
::***:******:** : * .*.:**:******
| AT5G39860.1 | M | S | N | R | R | S | R | - | Q | S | S | S | A | P | R | I | S | D | N | Q | M | I | D | L | V | S | K | L | R | Q | I | L | P | E | I | G | Q | R | R | R | S | D | K | A | S | A | S | K | V | L | Q | E | T | C | N | Y | I | R | N | L |
| Os011454_Os03t0 | M | S | S | R | R | S | R | S | R | Q | S | G | S | S | R | I | T | D | E | Q | I | S | D | L | V | S | K | L | Q | D | L | L | P | E | - | A | R | L | R | S | N | D | R | V | P | S | S | R | V | L | Q | E | T | C | N | Y | I | R | S | L |
| AT5G39860.1 | N | R | E | V | D | N | L | S | E | R | L | S | Q | L | L | E | S | V | D | E | D | S | P | E | A | A | V | I | R | S | L | L | M | |||||||||||||||||||||||||||
| Os011454_Os03t0 | H | Q | E | V | D | D | L | S | E | R | L | S | E | L | L | A | T | S | D | M | S | S | A | Q | A | A | I | I | R | S | L | L | M | |||||||||||||||||||||||||||