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| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT5G39860.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Sb002496 | not found in 86aa | AT3G28857.1 | 1st_not | 0.548571428 | II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G39860.1 -MSNRRSRQSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNL
Sb002496_Sorbi1 MSSGRRG-------RISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYIKSL
*.**. ****::: :*:***: :*** .:**.:.::****:*:*** **:.*
AT5G39860.1 NREVDNLSERLSQLLESVDEDSPEAAVIRSLLM
Sb002496_Sorbi1 HREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR
:****:****** *:.::*:***:* :*****
| AT5G39860.1 | - | M | S | N | R | R | S | R | Q | S | S | S | A | P | R | I | S | D | N | Q | M | I | D | L | V | S | K | L | R | Q | I | L | P | E | I | G | Q | R | R | R | S | D | K | A | S | A | S | K | V | L | Q | E | T | C | N | Y | I | R | N | L |
| Sb002496_Sorbi1 | M | S | S | G | R | R | G | - | - | - | - | - | - | - | R | I | S | D | D | E | I | N | E | L | I | S | K | L | Q | A | L | L | P | E | S | S | R | R | R | N | A | S | R | S | S | A | S | K | L | L | K | E | T | C | A | Y | I | K | S | L |
| AT5G39860.1 | N | R | E | V | D | N | L | S | E | R | L | S | Q | L | L | E | S | V | D | E | D | S | P | E | A | A | V | I | R | S | L | L | M | |||||||||||||||||||||||||||
| Sb002496_Sorbi1 | H | R | E | V | D | D | L | S | E | R | L | S | G | L | M | S | T | M | D | N | D | S | P | Q | A | E | I | I | R | S | L | L | R | |||||||||||||||||||||||||||