Input
| Putative repression domain
|
|
AT5G39860.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb022206 |
not found in 213aa |
AT1G26945.1 |
not_not |
0.537142857 |
III |
Sb003265 |
not found in 86aa |
AT1G26945.1 |
not_not |
0.485714285 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G39860.1 ----------------------------------------MSNRRSR-QSSSAPRISDNQ
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRRSRSRQSGSSRITEEQ
Sb003265_Sorbi1 ----------------------------------------MSSRRSR------ASVSEEE
**.**** . :::::
AT5G39860.1 MIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLNREVDNLSERLSQLLESVDE
Sb022206_Sorbi1 ISDLVSKLQDLLPE-ARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDM
Sb003265_Sorbi1 INELISRLQTLLPS-ARRRGGSEASTTKLLKETCSYIKSLHREVDDLSDRLSDLMATMDH
: :*:*:*: :**. .: : . ...::::*:***.**:.*::***:**:***:*: : *
AT5G39860.1 DSPEAAVIRSLLM
Sb022206_Sorbi1 SSAQAAVIRSLLM
Sb003265_Sorbi1 NSPGAEIIRSLLR
.*. * :*****
BoxShade v3.31 C (beta, 970507) Output
AT5G39860.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
S |
N |
R |
R |
S |
R |
- |
Q |
S |
S |
S |
A |
P |
R |
I |
S |
D |
N |
Q |
Sb022206_Sorbi1 |
L |
P |
F |
H |
H |
L |
C |
I |
S |
N |
L |
L |
A |
S |
L |
L |
T |
S |
Q |
F |
V |
S |
R |
S |
L |
A |
K |
L |
L |
S |
P |
I |
S |
Q |
T |
T |
T |
S |
T |
K |
M |
S |
S |
R |
R |
S |
R |
S |
R |
Q |
S |
G |
S |
S |
R |
I |
T |
E |
E |
Q |
Sb003265_Sorbi1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
S |
S |
R |
R |
S |
R |
- |
- |
- |
- |
- |
- |
A |
S |
V |
S |
E |
E |
E |
|
AT5G39860.1 |
M |
I |
D |
L |
V |
S |
K |
L |
R |
Q |
I |
L |
P |
E |
I |
G |
Q |
R |
R |
R |
S |
D |
K |
A |
S |
A |
S |
K |
V |
L |
Q |
E |
T |
C |
N |
Y |
I |
R |
N |
L |
N |
R |
E |
V |
D |
N |
L |
S |
E |
R |
L |
S |
Q |
L |
L |
E |
S |
V |
D |
E |
Sb022206_Sorbi1 |
I |
S |
D |
L |
V |
S |
K |
L |
Q |
D |
L |
L |
P |
E |
- |
A |
R |
L |
Q |
S |
N |
A |
R |
V |
P |
S |
A |
R |
V |
L |
Q |
E |
T |
C |
N |
Y |
I |
R |
S |
L |
H |
Q |
E |
V |
D |
D |
L |
S |
E |
R |
L |
S |
E |
L |
L |
A |
T |
S |
D |
M |
Sb003265_Sorbi1 |
I |
N |
E |
L |
I |
S |
R |
L |
Q |
T |
L |
L |
P |
S |
- |
A |
R |
R |
R |
G |
G |
S |
E |
A |
S |
T |
T |
K |
L |
L |
K |
E |
T |
C |
S |
Y |
I |
K |
S |
L |
H |
R |
E |
V |
D |
D |
L |
S |
D |
R |
L |
S |
D |
L |
M |
A |
T |
M |
D |
H |
|
AT5G39860.1 |
D |
S |
P |
E |
A |
A |
V |
I |
R |
S |
L |
L |
M |
Sb022206_Sorbi1 |
S |
S |
A |
Q |
A |
A |
V |
I |
R |
S |
L |
L |
M |
Sb003265_Sorbi1 |
N |
S |
P |
G |
A |
E |
I |
I |
R |
S |
L |
L |
R |
|
|