fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038564 SAQGCDLCLKLYDSPS in 83/357 AT2G48100.3 not_not 0.485714285 III
Pt038565 SAQGCDLCLKLYDSPS in 83/349 AT2G48100.3 not_not 0.467142857 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40310.1     MD----------TCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSL
pt038564_POPTR_ MDAEADPPTRSRTERHKCFACYKQFKKKEHLVEHMKISYHTPHQPKCGVCQKHCKSFESL
pt038565_POPTR_ MDAEADPPTRSRTERHKCFACYKQFKKKEHLVEHMKISYHTPHQPKCGVCQKHCKSFESL
                **          * *:** .**:**:*********:****: *:*.**:*:***:**:**

AT5G40310.1     REHLIGPLPKQECKNIFSIRGCRFCLTILESPNARRIHQERCQLSNVTS-GLMIRMAALG
pt038564_POPTR_ RNHLTGPLSRAGCSRTFSAQGCDLCLKLYDSPSSLGKHREICHLSAPASLGTKI----LP
pt038565_POPTR_ RNHLTGPLSRAGCSRTFSAQGCDLCLKLYDSPSSLGKHREICHLSAPASLGTKI----LP
                *:** ***.:  *.. ** :** :**.: :**.:   *:* *:**  :* *  *    * 

AT5G40310.1     LRNNSTIDYTSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPV
pt038564_POPTR_ FAGSVDVKYT-TKGAKAIAINCGLVGGGTDGSLDLCARVCLVDEDENIIFHTYVQPQSAV
pt038565_POPTR_ FAGSVDVKYT-TKGAKAIAINCGLVGGGTDGSLDLCARVCLVDEDENIIFHTYVQPQSAV
                : ..  :.** ::..:.:*:.* :****:***********:.**.**::*****:*  .*

AT5G40310.1     TNYRYEMTGIRPENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHL
pt038564_POPTR_ TDYRYEITGLTEEHLRNSKSHKEVQDRILEILYNGESARRLMSDSGKARLLVGHDLKRGL
pt038565_POPTR_ TDYRYEITGLTEEHLRNSKSHKEVQDRILEILYNGESARRLMSDSGKARLLVGHDLKRGL
                *:****:**:  *:**::   *..* :: *:* ***.  :: . .****:****.*.. *

AT5G40310.1     DSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRL
pt038564_POPTR_ DCLRINYPGHLLRDTAKYRPLLKTNLVSHSLKYLTKTYLGYDIQTGEHDPYVDCVSVMRL
pt038565_POPTR_ DCLRINYPGHLLRDTAKYRPLLKTNLVSHSLK--------YDIQTGEHDPYVDCVSVMRL
                *.*:::*.. ::****:* **:*:. :*:***        ***:.* :*** ***:.***

AT5G40310.1     YTRMRYQKHRAEAYPLASDTQNHNN-FAAWRQNELERMSPEELLDLSRSDYYCWCLD-SV
pt038564_POPTR_ YKRMRAQDHQGKGI----GTPNSDSGFESQKAEELENMTPDELYQISKSDYKCWCLDSSI
pt038565_POPTR_ YKRMRAQDHQGKGI----GTPNSDSGFESQKAEELENMTPDELYQISKSDYKCWCLDSSI
                *.*** *.*:.:.     .* * :. * : : :***.*:*:** ::*:*** ***** *:

AT5G40310.1     A-----
pt038564_POPTR_ AAGLNS
pt038565_POPTR_ AAGLNS
                *
BoxShade v3.31 C (beta, 970507) Output
AT5G40310.1     M D - - - - - - - - - - T C R N K C G G C Y R Q F N K K E H L V E H M R I S Y H S V H E P T C G I C N K H C R S F D S L
pt038564_POPTR_    M D A E A D P P T R S R T E R H K C F A C Y K Q F K K K E H L V E H M K I S Y H T P H Q P K C G V C Q K H C K S F E S L
pt038565_POPTR_    M D A E A D P P T R S R T E R H K C F A C Y K Q F K K K E H L V E H M K I S Y H T P H Q P K C G V C Q K H C K S F E S L
 
AT5G40310.1     R E H L I G P L P K Q E C K N I F S I R G C R F C L T I L E S P N A R R I H Q E R C Q L S N V T S - G L M I R M A A L G
pt038564_POPTR_    R N H L T G P L S R A G C S R T F S A Q G C D L C L K L Y D S P S S L G K H R E I C H L S A P A S L G T K I - - - - L P
pt038565_POPTR_    R N H L T G P L S R A G C S R T F S A Q G C D L C L K L Y D S P S S L G K H R E I C H L S A P A S L G T K I - - - - L P
 
AT5G40310.1     L R N N S T I D Y T S S R S P R V V A L S C K M V G G G S D G S L D L C A R V C I T D E S E N V V F H T Y V K P T I P V
pt038564_POPTR_    F A G S V D V K Y T - T K G A K A I A I N C G L V G G G T D G S L D L C A R V C L V D E D E N I I F H T Y V Q P Q S A V
pt038565_POPTR_    F A G S V D V K Y T - T K G A K A I A I N C G L V G G G T D G S L D L C A R V C L V D E D E N I I F H T Y V Q P Q S A V
 
AT5G40310.1     T N Y R Y E M T G I R P E N L R D A M R L K H A Q R K V Q E F L C N G E P M W K I R P R N G K A R I L V G H G L D N H L
pt038564_POPTR_    T D Y R Y E I T G L T E E H L R N S K S H K E V Q D R I L E I L Y N G E S A R R L M S D S G K A R L L V G H D L K R G L
pt038565_POPTR_    T D Y R Y E I T G L T E E H L R N S K S H K E V Q D R I L E I L Y N G E S A R R L M S D S G K A R L L V G H D L K R G L
 
AT5G40310.1     D S L Q L E Y S S S M I R D T A E Y P P L M K S S K L S N S L K Y L T Q A Y L G Y D I H V G I Q D P Y E D C V A T M R L
pt038564_POPTR_    D C L R I N Y P G H L L R D T A K Y R P L L K T N L V S H S L K Y L T K T Y L G Y D I Q T G E H D P Y V D C V S V M R L
pt038565_POPTR_    D C L R I N Y P G H L L R D T A K Y R P L L K T N L V S H S L K - - - - - - - - Y D I Q T G E H D P Y V D C V S V M R L
 
AT5G40310.1     Y T R M R Y Q K H R A E A Y P L A S D T Q N H N N - F A A W R Q N E L E R M S P E E L L D L S R S D Y Y C W C L D - S V
pt038564_POPTR_    Y K R M R A Q D H Q G K G I - - - - G T P N S D S G F E S Q K A E E L E N M T P D E L Y Q I S K S D Y K C W C L D S S I
pt038565_POPTR_    Y K R M R A Q D H Q G K G I - - - - G T P N S D S G F E S Q K A E E L E N M T P D E L Y Q I S K S D Y K C W C L D S S I
 
AT5G40310.1     A - - - - -
pt038564_POPTR_    A A G L N S
pt038565_POPTR_    A A G L N S
 
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