fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010965 not found in 336aa AT3G27970.1 1st_not 0.63 II
Sb007537 not found in 361aa AT5G40310.1 not_1st 0.507142857 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40310.1     --------MDTCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLRE
Sb010965_Sorbi1 MVDSRRESSETLRNKCAACFRQYNRMEHLVEHMKVSYHSVHEPKCGVCRKHCRSFESLRE
Sb007537_Sorbi1 -MDS--ASDAHGRHKCAACFRQFNKMEHLVEHMRAARHSSHEPRCDICRKHCRSFEALRD
                            *:**..*:**:*: *******: : ** *** *.:*.******::**:

AT5G40310.1     HL-IG--PLPKQE-CKNIFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIR----
Sb010965_Sorbi1 HL-IG--PLPKVE-CARVFSVRGCSICLNIFDSNATVRYHRAACQYSRAAP--MPR----
Sb007537_Sorbi1 HLGVGGSTLPKAAYCADAFAARGCTICLRVLASAAALGAHSAACRLSRIPPPMMSRALQH
                ** :*  .***   *   *: *** :** :: *  :   *   *: *. ..  * *    

AT5G40310.1     -----------MAALGLRNNSTIDYTSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDE
Sb010965_Sorbi1 -----------GGITG---------------RAVALACKMVGGGSDGSMDLCAKVCLIGE
Sb007537_Sorbi1 HQLPAATQPHGGGGEG---------------GALALGCKMVGAGSDGSLDVCARVCVIDE
                            .  *                .:**.*****.*****:*:**:**: .*

AT5G40310.1     SENVVFHTYVKPTIPVTNYRYEMTGIRPENLRD--AMRLKHAQRKVQEFLCNGEPMWKIR
Sb010965_Sorbi1 DEHIIFQTYVKPILPVTNYRYEVTGIRPEYLRD--AMPLKVAQRRIQEILCNGEPLWKLR
Sb007537_Sorbi1 QENILFEAFVKPLLPVTHYRYETTGIRPEHLRDGASTTVKNAQRRVEELLLNGEQPWKVR
                .*:::*.::*** :***:**** ****** ***  :  :* ***:::*:* ***  **:*

AT5G40310.1     PRN-GKARILVGHGLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYLTQAYLGY
Sb010965_Sorbi1 PRSYGRAKILVGHGLDHDLERLGLEYPAFMIRDTAKYPPLVKTSKLSNSLKYLTQAYLGY
Sb007537_Sorbi1 TSR-GRARLLVGHGLDHDLDALGMDYPGYLKRDTATYPPLMKTSKLSNSLRFLTHKYLGY
                .   *:*::*******:.*: * ::*.. : **** ****:*:*******::**: ****

AT5G40310.1     DIHVGIQDPYEDCVATMRLYTRMR-YQKHRA----EAYPLASDTQNHNNFAAWRQNELER
Sb010965_Sorbi1 DIHTGIQDPYEDCVAAMRLYIRMR-SQAHPR----DYNSGSGEAQ--NNYPAWRQRELER
Sb007537_Sorbi1 DIQTGHQHPFEDCVAAMRLYRRMRGQQQHPRGGGGDADAPAAATAD-QAFPAWRQRELER
                **:.* *.*:*****:**** ***  * *      :  . :. :   : :.****.****

AT5G40310.1     MSPEELLDLSRSDYYCWCLDSVA
Sb010965_Sorbi1 MSPEELLALSASDYYCWCLDY--
Sb007537_Sorbi1 MTPEELLRLSTPDYRCWCLDA--
                *:***** ** .** *****
BoxShade v3.31 C (beta, 970507) Output
AT5G40310.1     - - - - - - - - M D T C R N K C G G C Y R Q F N K K E H L V E H M R I S Y H S V H E P T C G I C N K H C R S F D S L R E
Sb010965_Sorbi1    M V D S R R E S S E T L R N K C A A C F R Q Y N R M E H L V E H M K V S Y H S V H E P K C G V C R K H C R S F E S L R E
Sb007537_Sorbi1    - M D S - - A S D A H G R H K C A A C F R Q F N K M E H L V E H M R A A R H S S H E P R C D I C R K H C R S F E A L R D
 
AT5G40310.1     H L - I G - - P L P K Q E - C K N I F S I R G C R F C L T I L E S P N A R R I H Q E R C Q L S N V T S G L M I R - - - -
Sb010965_Sorbi1    H L - I G - - P L P K V E - C A R V F S V R G C S I C L N I F D S N A T V R Y H R A A C Q Y S R A A P - - M P R - - - -
Sb007537_Sorbi1    H L G V G G S T L P K A A Y C A D A F A A R G C T I C L R V L A S A A A L G A H S A A C R L S R I P P P M M S R A L Q H
 
AT5G40310.1     - - - - - - - - - - - M A A L G L R N N S T I D Y T S S R S P R V V A L S C K M V G G G S D G S L D L C A R V C I T D E
Sb010965_Sorbi1    - - - - - - - - - - - G G I T G - - - - - - - - - - - - - - - R A V A L A C K M V G G G S D G S M D L C A K V C L I G E
Sb007537_Sorbi1    H Q L P A A T Q P H G G G G E G - - - - - - - - - - - - - - - G A L A L G C K M V G A G S D G S L D V C A R V C V I D E
 
AT5G40310.1     S E N V V F H T Y V K P T I P V T N Y R Y E M T G I R P E N L R D - - A M R L K H A Q R K V Q E F L C N G E P M W K I R
Sb010965_Sorbi1    D E H I I F Q T Y V K P I L P V T N Y R Y E V T G I R P E Y L R D - - A M P L K V A Q R R I Q E I L C N G E P L W K L R
Sb007537_Sorbi1    Q E N I L F E A F V K P L L P V T H Y R Y E T T G I R P E H L R D G A S T T V K N A Q R R V E E L L L N G E Q P W K V R
 
AT5G40310.1     P R N - G K A R I L V G H G L D N H L D S L Q L E Y S S S M I R D T A E Y P P L M K S S K L S N S L K Y L T Q A Y L G Y
Sb010965_Sorbi1    P R S Y G R A K I L V G H G L D H D L E R L G L E Y P A F M I R D T A K Y P P L V K T S K L S N S L K Y L T Q A Y L G Y
Sb007537_Sorbi1    T S R - G R A R L L V G H G L D H D L D A L G M D Y P G Y L K R D T A T Y P P L M K T S K L S N S L R F L T H K Y L G Y
 
AT5G40310.1     D I H V G I Q D P Y E D C V A T M R L Y T R M R - Y Q K H R A - - - - E A Y P L A S D T Q N H N N F A A W R Q N E L E R
Sb010965_Sorbi1    D I H T G I Q D P Y E D C V A A M R L Y I R M R - S Q A H P R - - - - D Y N S G S G E A Q - - N N Y P A W R Q R E L E R
Sb007537_Sorbi1    D I Q T G H Q H P F E D C V A A M R L Y R R M R G Q Q Q H P R G G G G D A D A P A A A T A D - Q A F P A W R Q R E L E R
 
AT5G40310.1     M S P E E L L D L S R S D Y Y C W C L D S V A
Sb010965_Sorbi1    M S P E E L L A L S A S D Y Y C W C L D Y - -
Sb007537_Sorbi1    M T P E E L L R L S T P D Y R C W C L D A - -
 
0