fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051356 not found in 346aa AT3G27970.1 1st_not 0.738571428 II
Gm038206 SQQGCQLCLALFDSPG in 82/366 AT3G27970.1 not_not 0.504285714 III
Gm040920 SQQGCQLCLALFDSPG in 82/366 AT3G27970.1 not_not 0.502857142 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40310.1     MD---------TCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLR
gm051356_Glyma1 MDCRIESA--ETHRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICRKHCRSFESLR
gm038206_Glyma1 MDAEADPPQNPITRHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLR
gm040920_Glyma1 MDAEADPPQNPITRHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLR
                **           *:** .*::*::* ***:***: ******:* **:*.***:**:***

AT5G40310.1     EHLIGPLPKQECKNIFSIRGCRFCLTILESPNARRIHQERCQLSNV----TSGLMIRMAA
gm051356_Glyma1 EHLIGPLPKQECRDIFSYRGCKFCLKVFESPNSRRIHQEKCQLSGT----NAGIIGRFSN
gm038206_Glyma1 EHLTGPLPRGICSKIFSQQGCQLCLALFDSPGSLIGHRETCRLSAPTCPGTSALPYIDSQ
gm040920_Glyma1 EHLTGPLPRGICSKIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPYIDSQ
                *** ****:  * .*** :**::** :::**.:   *:: *::*      .:.:    : 

AT5G40310.1     LGLRNNSTIDYTSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTI
gm051356_Glyma1 LGLRDNLAIG-GGARGPQVVALACKMVGGGSDGSLDLCARVCLIDEHENIIFHSYVKPPI
gm038206_Glyma1 FDCQDSSDENHAGEGPGGAVAIDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQPEI
gm040920_Glyma1 FDCQDFSDENHAGEGPGGAVAMDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYVQPEI
                :. ::    .  .     .**: *:**********:******: ** *.::**:**:* *

AT5G40310.1     PVTNYRYEMTGIRPENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDN
gm051356_Glyma1 PVANYRYETTGITPEYLRDAMPMRHVQRRIHDFLCNGEPMWTIRARGGRARILVGHGLDH
gm038206_Glyma1 PVTNYRYDITGLTEEHLKNAIPLKKVREKLLQILQNGESIGKVRLDGGKARLLVGHDLAH
gm040920_Glyma1 PVTNYRYDITGLTEEHLRNAMPLKEVREKLLQILHNGESIGKVRLDGGKARLLVGHDLAH
                **:****: **:  * *::*: ::..:.:: ::* ***.: .:*  .*:**:****.* :

AT5G40310.1     HLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATM
gm051356_Glyma1 DLESLQIEYRAEKIRDTAKYPPLMKTSKLSNSLK--------YDIQTGIQDPYEDCIATM
gm038206_Glyma1 DLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGTHDPYEDCISVM
gm040920_Glyma1 DLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGTHDPYEDCISVM
                .*:.*:::*    :****:* ****:. :*:***        ***: * :******::.*

AT5G40310.1     RLYTRMRYQKHRAEAYPLASDTQNHNNFA----AWRQNELERMSPEELLDLSRSDYYCWC
gm051356_Glyma1 RLYMRMRSQAHRVQEYPLASDPQNRNNFA----SWRQSEIERMSPEQMLEISRSDYYCWC
gm038206_Glyma1 RLYKRIRSQLHPEEDHGTMTLS---NNIVGMPDSWISRELDNLTPDELYAMSRSDYKCWC
gm040920_Glyma1 RLYKRIRSQLHPEEDHGTMTLS---NNIVGMPDSWISRELDNLTPDELYAMSRSDYKCWC
                *** *:* * *  : :   : .   **:.    :* . *::.::*:::  :***** ***

AT5G40310.1     LDSVA----
gm051356_Glyma1 LDSLY----
gm038206_Glyma1 LDLIPRLSA
gm040920_Glyma1 LDLIPRLSA
                ** :
BoxShade v3.31 C (beta, 970507) Output
AT5G40310.1     M D - - - - - - - - - T C R N K C G G C Y R Q F N K K E H L V E H M R I S Y H S V H E P T C G I C N K H C R S F D S L R
gm051356_Glyma1    M D C R I E S A - - E T H R N K C A A C F R Q F N K L E H L V E H M R I S Y H S V H E P T C G I C R K H C R S F E S L R
gm038206_Glyma1    M D A E A D P P Q N P I T R H K C L A C Y K Q Y K K K E H L I E H M K T S Y H S V H Q P R C G V C Q K H C K S F E S L R
gm040920_Glyma1    M D A E A D P P Q N P I T R H K C L A C Y K Q Y K K K E H L I E H M K T S Y H S V H Q P R C G V C Q K H C K S F E S L R
 
AT5G40310.1     E H L I G P L P K Q E C K N I F S I R G C R F C L T I L E S P N A R R I H Q E R C Q L S N V - - - - T S G L M I R M A A
gm051356_Glyma1    E H L I G P L P K Q E C R D I F S Y R G C K F C L K V F E S P N S R R I H Q E K C Q L S G T - - - - N A G I I G R F S N
gm038206_Glyma1    E H L T G P L P R G I C S K I F S Q Q G C Q L C L A L F D S P G S L I G H R E T C R L S A P T C P G T S A L P Y I D S Q
gm040920_Glyma1    E H L T G P L P R G I C S K I F S Q Q G C Q L C L A L F D S P G S L I D H R K I C R I S A P T C P G T S A L P Y I D S Q
 
AT5G40310.1     L G L R N N S T I D Y T S S R S P R V V A L S C K M V G G G S D G S L D L C A R V C I T D E S E N V V F H T Y V K P T I
gm051356_Glyma1    L G L R D N L A I G - G G A R G P Q V V A L A C K M V G G G S D G S L D L C A R V C L I D E H E N I I F H S Y V K P P I
gm038206_Glyma1    F D C Q D S S D E N H A G E G P G G A V A I D C E M V G G G S D G S L E L C A R V C L V D E D E R L I F H T Y V Q P E I
gm040920_Glyma1    F D C Q D F S D E N H A G E G P G G A V A M D C E M V G G G S D G S L E L C A R V C L V D E D E R L I F H T Y V Q P E I
 
AT5G40310.1     P V T N Y R Y E M T G I R P E N L R D A M R L K H A Q R K V Q E F L C N G E P M W K I R P R N G K A R I L V G H G L D N
gm051356_Glyma1    P V A N Y R Y E T T G I T P E Y L R D A M P M R H V Q R R I H D F L C N G E P M W T I R A R G G R A R I L V G H G L D H
gm038206_Glyma1    P V T N Y R Y D I T G L T E E H L K N A I P L K K V R E K L L Q I L Q N G E S I G K V R L D G G K A R L L V G H D L A H
gm040920_Glyma1    P V T N Y R Y D I T G L T E E H L R N A M P L K E V R E K L L Q I L H N G E S I G K V R L D G G K A R L L V G H D L A H
 
AT5G40310.1     H L D S L Q L E Y S S S M I R D T A E Y P P L M K S S K L S N S L K Y L T Q A Y L G Y D I H V G I Q D P Y E D C V A T M
gm051356_Glyma1    D L E S L Q I E Y R A E K I R D T A K Y P P L M K T S K L S N S L K - - - - - - - - Y D I Q T G I Q D P Y E D C I A T M
gm038206_Glyma1    D L D C L K M N Y P D H M L R D T A K Y R P L M K T N L V S H S L K Y L T R T Y L G Y D I Q S G T H D P Y E D C I S V M
gm040920_Glyma1    D L D C L K M N Y P D H M L R D T A K Y R P L M K T N L V S H S L K Y L T R T Y L G Y D I Q S G T H D P Y E D C I S V M
 
AT5G40310.1     R L Y T R M R Y Q K H R A E A Y P L A S D T Q N H N N F A - - - - A W R Q N E L E R M S P E E L L D L S R S D Y Y C W C
gm051356_Glyma1    R L Y M R M R S Q A H R V Q E Y P L A S D P Q N R N N F A - - - - S W R Q S E I E R M S P E Q M L E I S R S D Y Y C W C
gm038206_Glyma1    R L Y K R I R S Q L H P E E D H G T M T L S - - - N N I V G M P D S W I S R E L D N L T P D E L Y A M S R S D Y K C W C
gm040920_Glyma1    R L Y K R I R S Q L H P E E D H G T M T L S - - - N N I V G M P D S W I S R E L D N L T P D E L Y A M S R S D Y K C W C
 
AT5G40310.1     L D S V A - - - -
gm051356_Glyma1    L D S L Y - - - -
gm038206_Glyma1    L D L I P R L S A
gm040920_Glyma1    L D L I P R L S A
 
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