fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012761 not found in 329aa AT5G49620.1 1st_not 0.460829493 II
Os002933 not found in 228aa AT5G40350.1 not_1st 0.430875576 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40350.1     ---MEKRESSGGSGSGDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKS
Os002933_Os01t0 --MATRMCGRAGEPA----VRKGPWTLEEDLILVSYISQNGEGSWDNLARSAGLNRNGKS
Os012761_Os03t0 MDMAHERDASSEEEVMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKS
                     .  . . .      :*:****:****:*:.**: :*** *:.**:****:*.***

AT5G40350.1     CRLRWLNYLRPDVRRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKI
Os002933_Os01t0 CRLRWLNYLRPGVRRGSITPEEDMVIRELHSRWGNRWSKIAKHLPGRTDNEIKNYWRTKI
Os012761_Os03t0 CRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRV
                ***********.:***.***:*:: * ***::*********:************:***::

AT5G40350.1     QK----------------------------------------------------------
Os002933_Os01t0 HR----------------------KPR-----------------------------GRSQ
Os012761_Os03t0 QKHAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAAGQQQQQEGGTDTPPLSWQHGGSD
                ::                                                          

AT5G40350.1     -------------------YIIKSGETTTVGSQSSEFINHHATTSHVMNDTQETMDMYSP
Os002933_Os01t0 LLQE------------PCEDAMGMGMSTT-------------TSEAASTSASSGQSQASP
Os012761_Os03t0 GLYESPELPAPDASCWPAEYCAAAGGAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPSWP
                                        * : :              :.   ..:    .   *

AT5G40350.1     T--------TSYQHASN----------------INQQLNYGNYVPESGSIMMP------L
Os002933_Os01t0 G-----VW-DEYMQASSFPHPELVSFAADHHLEMA---GVGEVAAAAAAQFVP----TEF
Os012761_Os03t0 TQADGAEWFTTACDASSATGGVAMR---DTELELAQPPCQGGQTWTTSESSLPGLTFPDL
                             .**.                :      *  .  :.   :*      :

AT5G40350.1     SVDQSEQNYWS-VDDLW----------PMNIYNGN
Os002933_Os01t0 GFND---GFWNFVDNFWETM-------PVSDVV--
Os012761_Os03t0 AVADFEIGGFD-VDSFWTSMEDDQLWCPTQAAV--
                .. :   . :. **.:*          * .
BoxShade v3.31 C (beta, 970507) Output
AT5G40350.1     - - - M E K R E S S G G S G S G D A E V R K G P W T M E E D L I L I N Y I A N H G E G V W N S L A K S A G L K R T G K S
Os002933_Os01t0    - - M A T R M C G R A G E P A - - - - V R K G P W T L E E D L I L V S Y I S Q N G E G S W D N L A R S A G L N R N G K S
Os012761_Os03t0    M D M A H E R D A S S E E E V M G G D L R R G P W T V E E D L L L V N Y I A A H G E G R W N S L A R S A G L K R T G K S
 
AT5G40350.1     C R L R W L N Y L R P D V R R G N I T P E E Q L T I M E L H A K W G N R W S K I A K H L P G R T D N E I K N F W R T K I
Os002933_Os01t0    C R L R W L N Y L R P G V R R G S I T P E E D M V I R E L H S R W G N R W S K I A K H L P G R T D N E I K N Y W R T K I
Os012761_Os03t0    C R L R W L N Y L R P D L R R G N I T P Q E Q L L I L E L H S R W G N R W S K I A Q H L P G R T D N E I K N Y W R T R V
 
AT5G40350.1     Q K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os002933_Os01t0    H R - - - - - - - - - - - - - - - - - - - - - - K P R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G R S Q
Os012761_Os03t0    Q K H A K Q L K C D V N S Q Q F K D V M R Y L W M P R L V E R I Q A A A A G Q Q Q Q Q E G G T D T P P L S W Q H G G S D
 
AT5G40350.1     - - - - - - - - - - - - - - - - - - - Y I I K S G E T T T V G S Q S S E F I N H H A T T S H V M N D T Q E T M D M Y S P
Os002933_Os01t0    L L Q E - - - - - - - - - - - - P C E D A M G M G M S T T - - - - - - - - - - - - - T S E A A S T S A S S G Q S Q A S P
Os012761_Os03t0    G L Y E S P E L P A P D A S C W P A E Y C A A A G G A Q S G G T P A P E L S S T T A G S S S L S T D S G A G A Q P S W P
 
AT5G40350.1     T - - - - - - - - T S Y Q H A S N - - - - - - - - - - - - - - - - I N Q Q L N Y G N Y V P E S G S I M M P - - - - - - L
Os002933_Os01t0    G - - - - - V W - D E Y M Q A S S F P H P E L V S F A A D H H L E M A - - - G V G E V A A A A A A Q F V P - - - - T E F
Os012761_Os03t0    T Q A D G A E W F T T A C D A S S A T G G V A M R - - - D T E L E L A Q P P C Q G G Q T W T T S E S S L P G L T F P D L
 
AT5G40350.1     S V D Q S E Q N Y W S - V D D L W - - - - - - - - - - P M N I Y N G N
Os002933_Os01t0    G F N D - - - G F W N F V D N F W E T M - - - - - - - P V S D V V - -
Os012761_Os03t0    A V A D F E I G G F D - V D S F W T S M E D D Q L W C P T Q A A V - -
 
0