fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021634 not found in 485aa AT5G49620.1 1st_not 0.463133640 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G40350.1     -MEKRESSGGSGSGDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCR
Sb021634_Sorbi1 MAHERDASSEEEVMAGELRRGPWTVEEDLLLVNYVAAHGEGRWNSLARSAGLKRTGKSCR
                  .:*::*. .    .*:*:****:****:*:**:* **** *****:************

AT5G40350.1     LRWLNYLRPDVRRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKIQK
Sb021634_Sorbi1 LRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK
                **********:*******:*** *:***::*********:************:***::**

AT5G40350.1     Y-----------------------------------------------------------
Sb021634_Sorbi1 HAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAANASAGGAPPQPGAAADTPLSSSWQQ
                :                                                           

AT5G40350.1     ------------------------------IIKSGE-----------------TTTVGSQ
Sb021634_Sorbi1 GGADDGLYASPEELPTDACSWPPADCYYPAAVGDGDHHQLLMMNNPAVGPELSSTTAGSS
                                               : .*:                 :**.**.

AT5G40350.1     SSE---------------------FINHHATTSHVMNDTQETMDMYS----PTTSYQHAS
Sb021634_Sorbi1 SPSSDSGAGAQPCWLVAPVGGAEWFTTACDASSAVLAGQQQQQQQSSCLLGETTTW--AS
                *..                     * .   ::* *: . *:  :  *     **::  **

AT5G40350.1     NINQQLNYGNYVPESGSIMMPLSVDQSEQNYWSVDD-LWPMNIYNGN
Sb021634_Sorbi1 SELPELGVADF--EIGSFDV--------ESIWSMDDNLWFTQAQGV-
                .   :*. .::  * **: :        :. **:** **  :  .
BoxShade v3.31 C (beta, 970507) Output
AT5G40350.1     - M E K R E S S G G S G S G D A E V R K G P W T M E E D L I L I N Y I A N H G E G V W N S L A K S A G L K R T G K S C R
Sb021634_Sorbi1    M A H E R D A S S E E E V M A G E L R R G P W T V E E D L L L V N Y V A A H G E G R W N S L A R S A G L K R T G K S C R
 
AT5G40350.1     L R W L N Y L R P D V R R G N I T P E E Q L T I M E L H A K W G N R W S K I A K H L P G R T D N E I K N F W R T K I Q K
Sb021634_Sorbi1    L R W L N Y L R P D L R R G N I T P Q E Q L L I L E L H S R W G N R W S K I A Q H L P G R T D N E I K N Y W R T R V Q K
 
AT5G40350.1     Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb021634_Sorbi1    H A K Q L K C D V N S Q Q F K D V M R Y L W M P R L V E R I Q A A A A N A S A G G A P P Q P G A A A D T P L S S S W Q Q
 
AT5G40350.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I I K S G E - - - - - - - - - - - - - - - - - T T T V G S Q
Sb021634_Sorbi1    G G A D D G L Y A S P E E L P T D A C S W P P A D C Y Y P A A V G D G D H H Q L L M M N N P A V G P E L S S T T A G S S
 
AT5G40350.1     S S E - - - - - - - - - - - - - - - - - - - - - F I N H H A T T S H V M N D T Q E T M D M Y S - - - - P T T S Y Q H A S
Sb021634_Sorbi1    S P S S D S G A G A Q P C W L V A P V G G A E W F T T A C D A S S A V L A G Q Q Q Q Q Q Q S S C L L G E T T T W - - A S
 
AT5G40350.1     N I N Q Q L N Y G N Y V P E S G S I M M P L S V D Q S E Q N Y W S V D D - L W P M N I Y N G N
Sb021634_Sorbi1    S E L P E L G V A D F - - E I G S F D V - - - - - - - - E S I W S M D D N L W F T Q A Q G V -
 
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