fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044136 not found in 208aa AT3G27810.1 1st_not 0.596774193 II
Gm051381 not found in 206aa AT5G40350.1 not_1st 0.592165898 II
Gm051380 not found in 204aa AT5G40350.1 not_1st 0.566820276 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40350.1     MEKRESSGGSGSGDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRL
gm051380_Glyma1 MDKK---LGNTSHDPEVRKGPWTMEEDLILITYIANHGEGVWNSLAKAAGLKRTGKSCRL
gm044136_Glyma1 MDKKQ--LCNTSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRL
gm051381_Glyma1 MDKKQ--QCKTSQDPEVRKGPWTMEEDLILMNYIANHGEGVWNSLAKAAGLKRNGKSCRL
                *:*:     . * *.***************:.***************:*****.******

AT5G40350.1     RWLNYLRPDVRRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKIQKY
gm051380_Glyma1 RWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKH
gm044136_Glyma1 RWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKH
gm051381_Glyma1 RWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKH
                ********************* *****************************:***:***:

AT5G40350.1     IIKSGETTTVGSQSSEFINHH-ATTSHVMNDTQETMDMYSPTTSYQHASNINQQLNYGNY
gm051380_Glyma1 LKQASSSFQQQSSNSEIIYHPQACTSQV-STMAQPIETYSP-PSYQ--------------
gm044136_Glyma1 IKQA-ENFQQQISNNSEINDHQASTSHV-STMAEPMETYSP-PFYQ--------------
gm051381_Glyma1 IKQA-ENFQQQSSNNSEINDHQASTSHV-STMAEPMEMYSP-PCYQ--------------
                : :: ..     .... * .  * **:* .   :.:: *** . **              

AT5G40350.1     VPESGSIMMPLSV----------------DQSE-QNYWSVDDLWPMNIYNGN
gm051380_Glyma1 -----GMLDPFSI-QFPT-NPHHSSCCTNDDDN-NNYWSMEDIWSMQLANY-
gm044136_Glyma1 -----GMLEPFSSIQFPTINPDQSSCCTNDNNNSINYWSMEDIWSMQLLNGD
gm051381_Glyma1 -----GMLEPFST-QFPTINPDQSSCCTNDNNN-INYWSMEDSWSMQLLNGD
                     .:: *:*                 *:.:  ****::* *.*:: *
BoxShade v3.31 C (beta, 970507) Output
AT5G40350.1     M E K R E S S G G S G S G D A E V R K G P W T M E E D L I L I N Y I A N H G E G V W N S L A K S A G L K R T G K S C R L
gm051380_Glyma1    M D K K - - - L G N T S H D P E V R K G P W T M E E D L I L I T Y I A N H G E G V W N S L A K A A G L K R T G K S C R L
gm044136_Glyma1    M D K K Q - - L C N T S Q D P E V R K G P W T M E E D L I L I N Y I A N H G E G V W N S L A K A A G L K R T G K S C R L
gm051381_Glyma1    M D K K Q - - Q C K T S Q D P E V R K G P W T M E E D L I L M N Y I A N H G E G V W N S L A K A A G L K R N G K S C R L
 
AT5G40350.1     R W L N Y L R P D V R R G N I T P E E Q L T I M E L H A K W G N R W S K I A K H L P G R T D N E I K N F W R T K I Q K Y
gm051380_Glyma1    R W L N Y L R P D V R R G N I T P E E Q L L I M E L H A K W G N R W S K I A K H L P G R T D N E I K N Y W R T R I Q K H
gm044136_Glyma1    R W L N Y L R P D V R R G N I T P E E Q L L I M E L H A K W G N R W S K I A K H L P G R T D N E I K N Y W R T R I Q K H
gm051381_Glyma1    R W L N Y L R P D V R R G N I T P E E Q L L I M E L H A K W G N R W S K I A K H L P G R T D N E I K N Y W R T R I Q K H
 
AT5G40350.1     I I K S G E T T T V G S Q S S E F I N H H - A T T S H V M N D T Q E T M D M Y S P T T S Y Q H A S N I N Q Q L N Y G N Y
gm051380_Glyma1    L K Q A S S S F Q Q Q S S N S E I I Y H P Q A C T S Q V - S T M A Q P I E T Y S P - P S Y Q - - - - - - - - - - - - - -
gm044136_Glyma1    I K Q A - E N F Q Q Q I S N N S E I N D H Q A S T S H V - S T M A E P M E T Y S P - P F Y Q - - - - - - - - - - - - - -
gm051381_Glyma1    I K Q A - E N F Q Q Q S S N N S E I N D H Q A S T S H V - S T M A E P M E M Y S P - P C Y Q - - - - - - - - - - - - - -
 
AT5G40350.1     V P E S G S I M M P L S V - - - - - - - - - - - - - - - - D Q S E - Q N Y W S V D D L W P M N I Y N G N
gm051380_Glyma1    - - - - - G M L D P F S I - Q F P T - N P H H S S C C T N D D D N - N N Y W S M E D I W S M Q L A N Y -
gm044136_Glyma1    - - - - - G M L E P F S S I Q F P T I N P D Q S S C C T N D N N N S I N Y W S M E D I W S M Q L L N G D
gm051381_Glyma1    - - - - - G M L E P F S T - Q F P T I N P D Q S S C C T N D N N N - I N Y W S M E D S W S M Q L L N G D
 
0