fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023092 not found in 271aa AT5G63280.1 not_not 0.545105566 III
Gm034844 not found in 282aa AT5G63280.1 not_not 0.523992322 III
Pt027014 not found in 266aa AT5G63280.1 not_not 0.533589251 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G40710.1     MGRSNSQCPSHWI--LLCFFIS-----------SQFWGFSLPTSIIQQNLEGFKDPEDGF
pt027014_POPTR_ MGKAARITQILFLISLLSKQIL-----------SQDVGEHVAARTVK-------QEEGHA
gm034844_Glyma1 MKKATRIVSI-FVISMLCFQELIHVSSSPFLYAHQVYEESSGGRNLKQEQ---EQEQKHA
gm023092_Glyma0 MKKMWVSDHRLFLLCILCGLCF-------CLQFTTGHAGSNAGRTL--------NQEGGD
                * :        ::  :*.                           :        : :   

AT5G40710.1     HEIHCSRERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEW
pt027014_POPTR_ HKVHCSRERSRAAWQAIEEYLMPFVEREQYQISSKCRLHPSNDLFRDQEEHKIHVDINEW
gm034844_Glyma1 QEVHCSRERSRAARKVIEEYLTPFMERENYQLSSKCKLHPENDIFTDQEEHKIYIDRHEW
gm023092_Glyma0 HQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCMLHPDNDIYRDQEQHKSHIDINEW
                :::********.* : *:*** *::*:*.*::.. * :* .**:: :**:**   * :**

AT5G40710.1     RCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARLKSKCNPA
pt027014_POPTR_ KCGYCKKHFRAEKYLDQHFDNRHYNLLNISDGKCMADLCGALHCDFMMDSKSTKTKCNPA
gm034844_Glyma1 RCGYCKKSFREEKFLDQHFDSRHYNFLNLSHGKCLGDLCGALHCDAVMNFKSSRSKCNPA
gm023092_Glyma0 QCRYCKKSFYEEKHLDQHFDNRHSNLLNLSESQCLADVCGALHCDHEMNSGSKKSKCNPA
                :* :*** *  **.**:***.** *:** *..:*:.*:*******  ::    ::*****

AT5G40710.1     AAAKNRHLCESLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQKPKKR-SIV
pt027014_POPTR_ AVAKNHHLCESLADSCFPLNQGPSASRLHELFLHQFCDAHTCSGNKKLFPKGGKKKTSVF
gm034844_Glyma1 AAARNRHLCENLADNCFPISEGPSAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFF
gm023092_Glyma0 AAAKHKHLCESLADSCFPVSDGPAASQLHEFFLHQFCDAHSCTGSRKPFSRGHRKKTNVF
                *.*:::****.**:.***:..*.:*.:**::**:******:*:*  * :.:  :.: ...

AT5G40710.1     YIIFSIIVLVVLLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
pt027014_POPTR_ YLAISILTMMMIPLFYLIVYLHQSEMRKGTQELRRISKR--KTKPS
gm034844_Glyma1 RLAAGALILVLLPVFYLFLYLVQSDVKSRTQELRRISKAGWKSKPS
gm023092_Glyma0 YIFVSILLVILLLLYYLYIYLYQRGMKRETQVLKRISQASRKKKPS
                 :  . : :::: ::*  :** :  ::  :* *:** :   *.**
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     M G R S N S Q C P S H W I - - L L C F F I S - - - - - - - - - - - S Q F W G F S L P T S I I Q Q N L E G F K D P E D G F
pt027014_POPTR_    M G K A A R I T Q I L F L I S L L S K Q I L - - - - - - - - - - - S Q D V G E H V A A R T V K - - - - - - - Q E E G H A
gm034844_Glyma1    M K K A T R I V S I - F V I S M L C F Q E L I H V S S S P F L Y A H Q V Y E E S S G G R N L K Q E Q - - - E Q E Q K H A
gm023092_Glyma0    M K K M W V S D H R L F L L C I L C G L C F - - - - - - - C L Q F T T G H A G S N A G R T L - - - - - - - - N Q E G G D
 
AT5G40710.1     H E I H C S R E R S R V A W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E H K L R S D I N E W
pt027014_POPTR_    H K V H C S R E R S R A A W Q A I E E Y L M P F V E R E Q Y Q I S S K C R L H P S N D L F R D Q E E H K I H V D I N E W
gm034844_Glyma1    Q E V H C S R E R S R A A R K V I E E Y L T P F M E R E N Y Q L S S K C K L H P E N D I F T D Q E E H K I Y I D R H E W
gm023092_Glyma0    H Q I H C S R E R S R T A W K I I Q E Y L M P F V E K E K Y H I S K R C M L H P D N D I Y R D Q E Q H K S H I D I N E W
 
AT5G40710.1     R C G F C K K A F Y E E K Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V V D T A R L K S K C N P A
pt027014_POPTR_    K C G Y C K K H F R A E K Y L D Q H F D N R H Y N L L N I S D G K C M A D L C G A L H C D F M M D S K S T K T K C N P A
gm034844_Glyma1    R C G Y C K K S F R E E K F L D Q H F D S R H Y N F L N L S H G K C L G D L C G A L H C D A V M N F K S S R S K C N P A
gm023092_Glyma0    Q C R Y C K K S F Y E E K H L D Q H F D N R H S N L L N L S E S Q C L A D V C G A L H C D H E M N S G S K K S K C N P A
 
AT5G40710.1     A A A K N R H L C E S L A N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S Q K P K K R - S I V
pt027014_POPTR_    A V A K N H H L C E S L A D S C F P L N Q G P S A S R L H E L F L H Q F C D A H T C S G N K K L F P K G G K K K T S V F
gm034844_Glyma1    A A A R N R H L C E N L A D N C F P I S E G P S A G R L H E L F L H Q F C D A H T C S G K H K P F S R G G K D Q S S F F
gm023092_Glyma0    A A A K H K H L C E S L A D S C F P V S D G P A A S Q L H E F F L H Q F C D A H S C T G S R K P F S R G H R K K T N V F
 
AT5G40710.1     Y I I F S I I V L V V L L L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
pt027014_POPTR_    Y L A I S I L T M M M I P L F Y L I V Y L H Q S E M R K G T Q E L R R I S K R - - K T K P S
gm034844_Glyma1    R L A A G A L I L V L L P V F Y L F L Y L V Q S D V K S R T Q E L R R I S K A G W K S K P S
gm023092_Glyma0    Y I F V S I L L V I L L L L Y Y L Y I Y L Y Q R G M K R E T Q V L K R I S Q A S R K K K P S
 
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