fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm017159 not found in 171aa AT5G40710.1 1st_1st 0.389635316 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G40710.1     MGRSNSQCPSHWILLCFFISSQFWGFSLPTSIIQQNLEGFKDPEDGFHEIHCSRERSRVA
Sm017159_Selmo1 ---------------------------------------------GDHGVQCSRARSRTA
                                                             * * ::*** ***.*

AT5G40710.1     WKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEWRCGFCKKAFYEEK
Sm017159_Selmo1 RHILEEYLLPFVENENYALSPQCRLHASNDAFREQEREKQFYHIHDWRCGYCHKIFESEE
                 :*::***:*:**:*.* *.. **:* .** :****..*   .*::****:*:* * .*:

AT5G40710.1     YLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLV--VDTARL-KSKCNPAAAAKNRHLCE
Sm017159_Selmo1 YLDLHFDNRHSETLNVSRDNCLADVCGALHCDYMETKDKHKFSKNKCSP-SVDRNRHLCE
                *** ***.** : **.*:.:**:*:******* :   *. :: *.**.* :. :******

AT5G40710.1     SLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQKPKKRSIVYIIFSIIVLVV
Sm017159_Selmo1 KLANSCFPPQQGAQATRLNDFFLRQFCDAHSC---------KPGKR--------------
                .******* ::*:.*.**:***********:*         ** **              

AT5G40710.1     LLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
Sm017159_Selmo1 -----------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     M G R S N S Q C P S H W I L L C F F I S S Q F W G F S L P T S I I Q Q N L E G F K D P E D G F H E I H C S R E R S R V A
Sm017159_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G D H G V Q C S R A R S R T A
 
AT5G40710.1     W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E H K L R S D I N E W R C G F C K K A F Y E E K
Sm017159_Selmo1    R H I L E E Y L L P F V E N E N Y A L S P Q C R L H A S N D A F R E Q E R E K Q F Y H I H D W R C G Y C H K I F E S E E
 
AT5G40710.1     Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V - - V D T A R L - K S K C N P A A A A K N R H L C E
Sm017159_Selmo1    Y L D L H F D N R H S E T L N V S R D N C L A D V C G A L H C D Y M E T K D K H K F S K N K C S P - S V D R N R H L C E
 
AT5G40710.1     S L A N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S Q K P K K R S I V Y I I F S I I V L V V
Sm017159_Selmo1    K L A N S C F P P Q Q G A Q A T R L N D F F L R Q F C D A H S C - - - - - - - - - K P G K R - - - - - - - - - - - - - -
 
AT5G40710.1     L L L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
Sm017159_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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