fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G40710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027014 not found in 266aa AT5G63280.1 not_not 0.533589251 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G40710.1     MGRSNSQCPSHWILLCFFISSQFWGFSLPTSIIQQNL------EGFKDPEDGFHEIHCSR
pt027014_POPTR_ MGKA-----ARITQILFLIS------LLSKQILSQDVGEHVAARTVKQEEGHAHKVHCSR
                **::     ::   : *:**       *...*:.*::      . .*: *.  *::****

AT5G40710.1     ERSRVAWKIIQEYLMPYVEKERYQLPSTCRVHRDNDIYREQEEHKLRSDINEWRCGFCKK
pt027014_POPTR_ ERSRAAWQAIEEYLMPFVEREQYQISSKCRLHPSNDLFRDQEEHKIHVDINEWKCGYCKK
                ****.**: *:*****:**:*:**:.*.**:* .**::*:*****:: *****:**:***

AT5G40710.1     AFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGALHCDLVVDTARLKSKCNPAAAAKNRH
pt027014_POPTR_ HFRAEKYLDQHFDNRHYNLLNISDGKCMADLCGALHCDFMMDSKSTKTKCNPAAVAKNHH
                 *  *****:***.******* *.***::*********:::*:   *:******.***:*

AT5G40710.1     LCESLANSCFPVNKGSSANRLHDFFLRQFCDAHTCSGGSKPLSQKPKKR-SIVYIIFSII
pt027014_POPTR_ LCESLADSCFPLNQGPSASRLHELFLHQFCDAHTCSGNKKLFPKGGKKKTSVFYLAISIL
                ******:****:*:*.**.***::**:**********..* :.:  **: *:.*: :**:

AT5G40710.1     VLVVLLLYYSFVYLFRRGLKRRSQDLKRIRHNGLKKKPF
pt027014_POPTR_ TMMMIPLFYLIVYLHQSEMRKGTQELRRISKR--KTKPS
                .:::: *:* :***.:  ::: :*:*:** :.  *.**
BoxShade v3.31 C (beta, 970507) Output
AT5G40710.1     M G R S N S Q C P S H W I L L C F F I S S Q F W G F S L P T S I I Q Q N L - - - - - - E G F K D P E D G F H E I H C S R
pt027014_POPTR_    M G K A - - - - - A R I T Q I L F L I S - - - - - - L L S K Q I L S Q D V G E H V A A R T V K Q E E G H A H K V H C S R
 
AT5G40710.1     E R S R V A W K I I Q E Y L M P Y V E K E R Y Q L P S T C R V H R D N D I Y R E Q E E H K L R S D I N E W R C G F C K K
pt027014_POPTR_    E R S R A A W Q A I E E Y L M P F V E R E Q Y Q I S S K C R L H P S N D L F R D Q E E H K I H V D I N E W K C G Y C K K
 
AT5G40710.1     A F Y E E K Y L D K H F D S R H Y N L L N A S H G K C L S D L C G A L H C D L V V D T A R L K S K C N P A A A A K N R H
pt027014_POPTR_    H F R A E K Y L D Q H F D N R H Y N L L N I S D G K C M A D L C G A L H C D F M M D S K S T K T K C N P A A V A K N H H
 
AT5G40710.1     L C E S L A N S C F P V N K G S S A N R L H D F F L R Q F C D A H T C S G G S K P L S Q K P K K R - S I V Y I I F S I I
pt027014_POPTR_    L C E S L A D S C F P L N Q G P S A S R L H E L F L H Q F C D A H T C S G N K K L F P K G G K K K T S V F Y L A I S I L
 
AT5G40710.1     V L V V L L L Y Y S F V Y L F R R G L K R R S Q D L K R I R H N G L K K K P F
pt027014_POPTR_    T M M M I P L F Y L I V Y L H Q S E M R K G T Q E L R R I S K R - - K T K P S
 
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